Gene HS_0702 details

Gene Information

• Locus tag: HS_0702
• Symbol: dctQ
• ID: 4240190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 744433
• End bp: 746298
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638104254
• Product: TRAP dicarboxylate transporter, permease component
• Protein accession: YP_718914
• Protein GI: 113460847
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component; [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component
• TIGRFAM ID: [TIGR00786] TRAP transporter, DctM subunit

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000972925
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAA TGAACAAGTT AGAAGAATGG GTTGGCGGGA CATTATTCCT CGCAATTTTC 
CTGATTTTAA TTGCACAAAT TGTTGCACGT CAAGTTATTC ATATGCCACT TATATGGTCG 
GAAGAATTAG CACGTTTGCT GTTTGTTTAT ACGGCATTAT TGGGGATCAG TATGGCGGTA 
CGTGCACAAC AACACGTCTA TATTGACTTT ATTACCAATT TAATGCCGCT GACAATCAAA 
CGTATGGCGA TGACCTTTGT TCAATTATTA ATTTTTGTCT CAATTATTCT GTTTATCTAC 
TTAGGTTATG GCGTTTGGGC AGACGCAACT TTTCCTATGG AAGCATTAAA AGCTACCTTT 
GGAACGGAAA TTACGCAAAA ATGGCTCTAC GCAGGATTGC CGATTATTGC ATCTTTGATG 
TTATTCCGTT TTTTAGAAGC TCAAGCAGAA AACTTTAGAA ACAAAGCCAC TTACTTGCCT 
GTTTCTTTTT TCCTTGTAAG TGCGGTCATT ATTTTTGCGA TTTTATATTT TCAGCCGGAA 
TGGTTTAAAT CTCTGCGTAT TTCTAACTAT GTAAAATTCG GTAAAAATGC CGTTTATATC 
GCTTTAGCGG TTTGGTTAGT GATTATGTTC TTAGGCACGC CTGTAGGATG GTCATTATTT 
ATTGCCGCTT TACTTTATTT TTCAATGACA CGTTGGAATA TCACTTATTC CGCATCGGGT 
AAATTAGTTG ATAGCTTAGA CAGCTTCCCG TTATTGTCCG TACCGTTTTT TATCTTAACC 
GGTATTTTGA TGAACACTGG CGGTATCACT GAGCGTATCT TCCACTTCGC AAAAACGTTA 
TTAGGACACT ATACCGGTGG TATGGGACAT GTAAATATCG GTGCTAGCTT AATTTTTTCG 
GGTATGTCAG GATCTGCTTT GGCAGATGCT GGCGGTTTAG GTCAATTGGA AATCAAAGCG 
ATGCGTGATG CAGGCTATGA TGACGATATT TGCGGTGGTA TTACTGCTGC CTCCTGTATC 
ATCGGTCCGT TAGTTCCGCC AAGTATTGCA ATGATAATCT ATGGTGTTAT TGCTAATGAA 
TCCATCGCAA AGCTATTTGT AGCAGGTTTT GTACCTGGCG TGTTGGTTAC CATCGCATTG 
ATGGTCATGA ACTACTATGT TTCTAAAAAA CGTGGTTACC CTAAAACACC AAAGGCGAGC 
AAAGCAGAAG TTTGTGCCGC ATTTAAAGAG ACATTTTGGG CAATTTTGAC ACCGTTTTTG 
ATTATTGGTG GTATTTTCTC TGGTTTATTT ACACCGACAG AAGCGGCGGT CGTTGCTGCT 
GCATATTCCG TAATTGTAGG AAAGTTTGTT TATAATGATT TGAATCTAAA GAATTTCCTC 
AAAAGCTGTG TAGAAGCAGT ATCTATTACC GGTGTAACCG CATTAATGGT AATGACAGTC 
ACTTTCTTCG GTGACATGAT TGCCCGTGAA CAGGTTGCGA TGAAAATTGC GGAAATTTTT 
GTTGCTGTTG CAGATTCGCC TATCACAGTG TTAATTATGA TCAATTTGCT TCTCTTATTT 
TTAGGAATGT TCATTGACGC CTTGGCACTA CAATTTTTAG TGTTGCCAAT GTTGATTCCA 
ATTGCGATGC AATTTGGTAT TGATCTTGTC TTTTTTGGGG TCATGACTAC ATTAAATATG 
ATGATTGGTA TTTTAACCCC TCCGATGGGA ATGGCGTTAT TTGTCGTTGC TCGGGTGGGT 
AATATGCCTG TAAGTGTGGT AGCAAAAGGC GTTTTACCTT TCTTGATACC AATTTTTATG 
ACCTTAGTAT TGATTACGAT TTTCCCACAA ATCATTACAT TTATACCTAA CTTGCTAATG 
CTTTAG 

 

Protein sequence

MKIMNKLEEW VGGTLFLAIF LILIAQIVAR QVIHMPLIWS EELARLLFVY TALLGISMAV 
RAQQHVYIDF ITNLMPLTIK RMAMTFVQLL IFVSIILFIY LGYGVWADAT FPMEALKATF 
GTEITQKWLY AGLPIIASLM LFRFLEAQAE NFRNKATYLP VSFFLVSAVI IFAILYFQPE 
WFKSLRISNY VKFGKNAVYI ALAVWLVIMF LGTPVGWSLF IAALLYFSMT RWNITYSASG 
KLVDSLDSFP LLSVPFFILT GILMNTGGIT ERIFHFAKTL LGHYTGGMGH VNIGASLIFS 
GMSGSALADA GGLGQLEIKA MRDAGYDDDI CGGITAASCI IGPLVPPSIA MIIYGVIANE 
SIAKLFVAGF VPGVLVTIAL MVMNYYVSKK RGYPKTPKAS KAEVCAAFKE TFWAILTPFL 
IIGGIFSGLF TPTEAAVVAA AYSVIVGKFV YNDLNLKNFL KSCVEAVSIT GVTALMVMTV 
TFFGDMIARE QVAMKIAEIF VAVADSPITV LIMINLLLLF LGMFIDALAL QFLVLPMLIP 
IAMQFGIDLV FFGVMTTLNM MIGILTPPMG MALFVVARVG NMPVSVVAKG VLPFLIPIFM 
TLVLITIFPQ IITFIPNLLM L