| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0618 |
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| Symbol | menF |
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| ID | 4240104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 663862 |
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| End bp | 665145 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638104170 |
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| Product | isochorismate synthase |
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| Protein accession | YP_718830 |
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| Protein GI | 113460763 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.734802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAATT TGCACGAGAT TAAGGCTGAG TTTATTCGCT TAATTAATCA ATACCAATTT
GACCCTAAAA ACGACTTTTC CGTTCTTCGT TTGGATTTAA ATGAAGAATT GAATTTACTC
GGTTGGTTAA AAGCTCAACA TCATTATCCG CAATTTTATC TTAATTTTCG TGATACCAAT
AAAAAAATCT TAGGGCTTGG AGAAATATGT CGCTTTACGC AAGTTAAATC AGCACAAACG
TTTGTGCAAC AATTTAATTT ACCTCTTATC GGTGGCTGTC AATTTAATGG TGAACCTCTA
TTTATTTTGC CACGTTTATC ATTCATACAA GAACAAAAAC TTGTTATTCA ACTCATTATT
GATAATAAAA AACCTTGGGA ACAAGAAAAA TATGAGCTGT TGAATATTAT TCATTCTTTG
GAAAAACAAG TTCAATTAAA CCCAATCCAT CAATCAATTC AATTGATAAC AACAAAAGCA
AATCAAACAG AATGGTGTTT ATGGGTAGAA AAAGCATTAC ATGAAATTAA GCAAAAAAAT
CTGACTAAAG TTGTGCTGGC AAATGAAACC GACTTTAAAA CTGATAGCCC ATTAAACGCT
AAGGATTTTT TAGCTGAAAG TGAGAAGTAC AATACAGGTT GCTATCATTT TTTGTTTGCT
CAAAATAATA CACAAGCATT TATAGGCTCC ACGCCTGAGA GATTATATGT TCGTAAACAA
AATCGCCTAA TCACTGAAGC ATTGGCGGGG ACAGCTTTTA TAACAAATGA TGAACATATT
AATCAGCAAC AAGCTCAGTG GTTATTACAA GATCCGAAAA ATATTTATGA AAACAGTTTG
GTTGTAGAGG GCATTTGTCA ACATCTTATA CCCTATGTTG AGGAAATTAC GGTGAGTGAA
CTGGAAATTA AGCAACTACG CCAAGTTCAA CATTTAAAAC GAGAAATTTC TGCCCGACTT
AAAGCAGGAA ATACTGATGC GGTATGTTTA AATGCAATAC ATCCAACCGC AGCTATTGCC
GGTTTACCAC AAAAAGAAGC AAAAGTGTTC TTGCAAAATA CCGAAACTTT TGACCGCACT
TGGTATGCAG GTGCATTGGG AATAATGACT GAAACAGAAT CTGAGTTTTG TGTGACTATT
CGTAGCTCAT TTATTGAACA AGATTATATT CGTATATTTG CCGGTGCCGG TATTGTTGAA
GGTTCTATTC CTTTATTAGA ATGGCAAGAA ATAGAACGTA AAGCACTAGG GCTAATATCC
CTATTACAGA AAGAAACGGA GTAG
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| Protein sequence | MDNLHEIKAE FIRLINQYQF DPKNDFSVLR LDLNEELNLL GWLKAQHHYP QFYLNFRDTN
KKILGLGEIC RFTQVKSAQT FVQQFNLPLI GGCQFNGEPL FILPRLSFIQ EQKLVIQLII
DNKKPWEQEK YELLNIIHSL EKQVQLNPIH QSIQLITTKA NQTEWCLWVE KALHEIKQKN
LTKVVLANET DFKTDSPLNA KDFLAESEKY NTGCYHFLFA QNNTQAFIGS TPERLYVRKQ
NRLITEALAG TAFITNDEHI NQQQAQWLLQ DPKNIYENSL VVEGICQHLI PYVEEITVSE
LEIKQLRQVQ HLKREISARL KAGNTDAVCL NAIHPTAAIA GLPQKEAKVF LQNTETFDRT
WYAGALGIMT ETESEFCVTI RSSFIEQDYI RIFAGAGIVE GSIPLLEWQE IERKALGLIS
LLQKETE
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