Gene HS_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0515 
SymbolglpR 
ID4239997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp557001 
End bp557759 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content36% 
IMG OID638104063 
Productglycerol-3-phosphate regulon repressor (glp operon repressor) 
Protein accessionYP_718726 
Protein GI113460660 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.128818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGT CCCTACGTCA TAAAAAAATA ATTGAGTTAA TAAAGCAAAA AGGTTATTTA 
AGTACGGAGG AGTTGGTTAA TTTTCTTAGC GTCAGTCCCC AAACCATTAG GCGAGATTTA
AATGAACTGG CGGAAAATAA TCTGATTACA CGTCATCACG GTGGAGCTAC TTCACTTTCA
ACATCAGAGA ACAGTGATTA TAGTGAACGT CAACATTTCT TCTCGTCTGA AAAACGGCGT
ATTGGTCAAG AGGTGGCAAA AATTATTCCT AACGGTTCAT CTTTATTCAT TGATATTGGT
ACAACACCGG AAGCTGTTGC TAAAGCATTA TTGGATCATC AAAACTTAAG AATTGTTACA
AATAATCTTA ACGCAGCCTA TATTTTGATG CAAAACAAAA CATTTGATAT TACGATGGCT
AGCGGATCTT TGCGTCAAGA TGGAGGTATT ATTGGTGAAG CGACAATTGC ATTTATCGGA
CAATTCCGTT TGGATTTCGG AATATTAGGC ATCAGCAGTA TTGATTTGGA CGGTTCTTTA
TTGGATTACG ATTATCATGA AGTGCAAGTA AAACGTGCAA TTATGGAAAG CTCAAGAAAT
ACTATTTTAG TAACAGATCA TTCCAAATTT ACTCGCCGAG CAATGGTATA TTTAGGTTCG
TTAACAGAAG TAGACTATTT GTTTACAAAC ACCACACCAC CTGACTCCAT GCTTAGCCTT
ATTCATTCAA GCAATGTAAA ACTGCATATT TGTCAATAG
 
Protein sequence
MKQSLRHKKI IELIKQKGYL STEELVNFLS VSPQTIRRDL NELAENNLIT RHHGGATSLS 
TSENSDYSER QHFFSSEKRR IGQEVAKIIP NGSSLFIDIG TTPEAVAKAL LDHQNLRIVT
NNLNAAYILM QNKTFDITMA SGSLRQDGGI IGEATIAFIG QFRLDFGILG ISSIDLDGSL
LDYDYHEVQV KRAIMESSRN TILVTDHSKF TRRAMVYLGS LTEVDYLFTN TTPPDSMLSL
IHSSNVKLHI CQ