| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0458 |
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| Symbol | pilD |
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| ID | 4239939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 489741 |
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| End bp | 490448 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638104005 |
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| Product | prepilin peptidase |
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| Protein accession | YP_718668 |
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| Protein GI | 113460603 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTATC TAGCTTATAT GTTGTTTGGT GGACTTTGTG GGTTATGGGT TTACCTTTAT
GTCAGGCAAT TTTCTGCTCA GATTAATAAA CAAGTTTACT CGACTTTTTG CGAAATTTTC
CCCGAAAATG CACCGCACTT GATGCCTATG TCTATCTTAC GACGGAAAAA GTGCGGTCAT
TTTTCTATGT ATTTTTTGTG TGGTGGCCTT TGGTGTAATA TATGTTTAAA TTTCCCACAA
AATATTTATG TTGGTTTATG GTTAGCATGT TGCGGTTATT TAATTTTTTG CCTTGTTTTA
GTGGATTGGC TATACCAACT CGTTTCACAA ACCTTATGCC AAGCCCTATT TATTTTAGGG
TTATTGGGTG CTTATCAAGG TATTAGCCCA TTGACTTTGG AGCAGTCTTT AATTGGTAGC
TTATCAGGCT TTTCGGTTTT TTATCTTATT TACATTGTTG CAAAATTATT CTATCGTTAT
GAAGCTTTAG GACGTGGTGA TTACTGGTTA ATGTTAGGGT TAGGGAGCTT TATATCTTGG
ACAAAATTAC CGTTGCTCAT TTTTCTTGCC TGCCTCACAG GATTAATATA TGTCGTTTTT
AATGCAAGAG ACAAAAAAAC AATATTTATT CCTTTTGCCC CGTTCTTATG TCTCTCAACC
ATTATCGTAT ACTTGCTTAA TTTTCTAAGG GAGGATATTC TTCCTTAA
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| Protein sequence | MIYLAYMLFG GLCGLWVYLY VRQFSAQINK QVYSTFCEIF PENAPHLMPM SILRRKKCGH
FSMYFLCGGL WCNICLNFPQ NIYVGLWLAC CGYLIFCLVL VDWLYQLVSQ TLCQALFILG
LLGAYQGISP LTLEQSLIGS LSGFSVFYLI YIVAKLFYRY EALGRGDYWL MLGLGSFISW
TKLPLLIFLA CLTGLIYVVF NARDKKTIFI PFAPFLCLST IIVYLLNFLR EDILP
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