Gene HS_0417 details

Gene Information

• Locus tag: HS_0417
• Symbol: typA
• ID: 4239893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 443430
• End bp: 445280
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638103960
• Product: GTP-binding protein
• Protein accession: YP_718627
• Protein GI: 113460563
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0525699
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGATA AAATTGATAT TCAAAAATTA CGCAATATTG CAATTATTGC ACACGTTGAC 
CATGGTAAAA CAACCCTCGT TGACAAGCTT CTTAAACTTT CAGGCACGTT AGACACTTCT 
CGTGGTGATA CTGATGAACG TGTAATGGAT TCCAATGACT TGGAAAAAGA ACGTGGAATT 
ACTATTCTTG CGAAAAATAC TGCAATTAAT TGGAACGGCT ATCGTATTAA TATCGTGGAT 
ACACCAGGAC ACGCAGACTT CGGTGGAGAA GTAGAGCGAG TACTTTCAAT GGTAGATTCC 
GTATTGTTGG TTGTCGATGC CTTTGACGGT CCAATGCCAC AAACCCGCTT CGTCACCCAA 
AAAGCCTTCT CACATGGTTT AAAACCGATT GTTGTAATCA ATAAAGTGGA TCGTCCCGGA 
GCACGTCCTG ACTGGGTAGT AGATCAAGTA TTTGATCTCT TTGTAAATTT GGGTGCCACA 
GATGAACAAC TTGATTTTCC TATTATTTAT GCTTCTGCGT TAAACGGTGT AGCAGGTCTT 
GAACATGAAA AATTGGCTTC TAATATGGAT CCGCTCTTTG AAGCAATTAT TGAACATGTT 
TCACCGCCGG ATGTTGAGTT GGATGCACCG TTCCAAATGC AAATCTCCCA ATTAGATTAC 
AGCAAATATT TAGGTGTCAT TGGGATTGGA CGCATTAAAC GTGGTACAGT AAAACCAAAT 
CAACCTGTTA CATTAATTGA TCCTGAAGGG AAAACCCGTA ACGGTCGTAT CGGTCAGGTT 
TTAGGACACT TAGGTTTACA GCGTTACGAA GCTCAAGAAG CTTATGCAGG TGATATTATA 
GCCGTTACCG GTTTAGGTGA GTTAAATATT TCAGATACTG TTTGTGATAT TAACAATGTG 
GAAGCATTGC CTGCATTAAG CGTTGATGAA CCGACAGTAA CTATGTTCTT TTGTGTAAAT 
ACTTCACCAT TCTGTGGAAA AGAAGGTAAA TTTGTCACTT CCCGCCAAAT TTTAGAGCGT 
TTGAAAAAAG AGCTTGTACA TAATGTGGCA TTGCGTGTAG AAGAAACGGA TGATTCGGAT 
ATTTTCAGTG TATCCGGCCG TGGGGAATTG CACTTATCCG TATTAATTGA AAATATGCGT 
CGTGAAGGCT ATGAGCTGGC GGTTTCTCGT CCTAAAGTAA TTTTTAAAGA AATTGATGGT 
CGCAAGCAAG AGCCTTTCGA GCAAGTGACT ATTGATATTG AAGAACAACA TCAAGGTTCT 
GTCATGGAAG CACTCGGTAT TCGCAAAGGT GAAGTACGTG ATATGATACC GGACGGTAAA 
GGTCGTACTC GCTTAGAATA CATTATTCCA AGTCGTGGTC TCATTGGTTT CCGTAATGAA 
TTTATGACAA TGACTTCAGG GACAGGCTTA CTTTACTCAA GTTTCAGCCA TTATGATGAT 
GTAAAACCGG GTGAAATTGG CCAGCGTATT AACGGCGTAC TGATTTCAAA CGGTACGGGT 
AAAGCCTTGG CTTACTCACT TTATGCCCTA CAAGATCGTG GCAAGCTAAT GGTTGATCAT 
GGTGCAGAAA TTTATGAAGG ACAAATAATT GGTATTCATA GTCGCTCTAA TGATTTAACT 
GTCAACCCGC TGGAGGGTAA AAAACTCACC AATATGCGTG CTTCAGGTAA AGATGATGCG 
TTGACTTTAA CCACACCATT GAAACTCACA CTTGAACAAG CATTAGAGTT TATTGATGAT 
GATGAGTTAG TTGAAGTAAC GCCAATTTCT GTACGTATTC GTAAAAAACT TTTAACTGAG 
GTAGAGCGTA AACGTGCAAA CCGTACGACA ACGAGTACCA GTACCCGTTA A 

 

Protein sequence

MTDKIDIQKL RNIAIIAHVD HGKTTLVDKL LKLSGTLDTS RGDTDERVMD SNDLEKERGI 
TILAKNTAIN WNGYRINIVD TPGHADFGGE VERVLSMVDS VLLVVDAFDG PMPQTRFVTQ 
KAFSHGLKPI VVINKVDRPG ARPDWVVDQV FDLFVNLGAT DEQLDFPIIY ASALNGVAGL 
EHEKLASNMD PLFEAIIEHV SPPDVELDAP FQMQISQLDY SKYLGVIGIG RIKRGTVKPN 
QPVTLIDPEG KTRNGRIGQV LGHLGLQRYE AQEAYAGDII AVTGLGELNI SDTVCDINNV 
EALPALSVDE PTVTMFFCVN TSPFCGKEGK FVTSRQILER LKKELVHNVA LRVEETDDSD 
IFSVSGRGEL HLSVLIENMR REGYELAVSR PKVIFKEIDG RKQEPFEQVT IDIEEQHQGS 
VMEALGIRKG EVRDMIPDGK GRTRLEYIIP SRGLIGFRNE FMTMTSGTGL LYSSFSHYDD 
VKPGEIGQRI NGVLISNGTG KALAYSLYAL QDRGKLMVDH GAEIYEGQII GIHSRSNDLT 
VNPLEGKKLT NMRASGKDDA LTLTTPLKLT LEQALEFIDD DELVEVTPIS VRIRKKLLTE 
VERKRANRTT TSTSTR