Gene HS_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0414 
SymbolftsY 
ID4239890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp439750 
End bp441093 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content38% 
IMG OID638103957 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_718624 
Protein GI113460560 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAG AAAAGAAAAA AGGTAGATTT TGGTCTTGGT TAGGATTGGG GCAGAAAACA 
GAAGATCCGA TATCAGAACA GCAACTGGAG CAACAATCAG GACAACAGGA AAGTGTTGCA
AGAGAGCAAG AATCTACTTC GAATATAGAG CAGGTTATAA AAGAACCAGA GCATATTGAT
GACACTTCAT CAGACTTGGT TTTATCCGCT CATTTACAGG AGCAAGAGGT AAAAGAATAC
TCACTTCATG AACGGGAACT GTCTCAAAAT ACTGTAATAG AAATAGAAAG TGCGGTTGAA
AAAACAGATA TTTTTATTGA AGAGGATACA ACATATCAGG CTATCAATAA GGAGCAGCGA
GAGGAAACAA CGATTACATC GGTTAAAGAA GTAATACCGC AAGAACAAGA AAAAACGGCT
GAAAATGGTT TTTTTAGTCG TTTAGTCAAA GGATTATTAA AAACCAAGCA AAATATCGGT
ATTGGTTTCC GCAGTTTGTT TTTGGGCAAG AAAATTGATG ACGAGTTATT TGAGGAGTTA
GAAGAACAAC TATTGATCGC TGATATCGGT GTGCCAACTA CGACAAAAAT CATCAATAAT
TTAATTCAGC ATGCAAGCCG TAAACAATTG CAAGAGGCAG ATTTACTTTA TCAACAACTT
AAAGTGGAAT TAGCCGATAT TTTAAAACCG GTCGAGCAAC CTTTACAACT TGATAACAGT
AAAAAACCTT ATGTTATCTT GATGGTTGGT GTAAATGGTG TGGGTAAAAC CACTACAATC
GGCAAATTGG CTAATCAATT CCAAAGGCAA GGCAAATCCG TTATGTTGGC GGCAGGAGAT
ACGTTCCGTG CTGCGGCTGT TGAGCAGCTT CAAGTTTGGG GAGAACGTAA CCAGATTCCT
GTTATTGCAC AAAGTACAGG TTCAGATTCT GCTTCTGTCA TTTTTGATGC TATGCAATCG
GCAGTGGCGC GTAATATTGA TGTGCTTATT GCGGATACGG CTGGGCGTTT GCAGAATAAA
AATAACCTGA TGGATGAGTT GAAAAAAATT GTTCGTGTGA TAAAAAAATG TGATGAAACA
GCACCGCATG AAATCATGCT AACTCTTGAT AGTGGGACGG GACAAAATGC AATTAGTCAA
GCGAAATTGT TCAATGAAGC GGTAGGATTA ACGGGTATTA GTCTAACCAA GTTGGATGGA
ACAGCAAAAG GCGGTGTTAT TTTTGCGATT GCAGATCAAT TTAATTTACC TATTCGCTAT
ATTGGTGTCG GTGAGAAAAT CGATGATTTA CGCCCATTCC AAGCAGATGA ATTTATTGAC
GCACTTTTTA TACAAGAAGA GTAA
 
Protein sequence
MSEEKKKGRF WSWLGLGQKT EDPISEQQLE QQSGQQESVA REQESTSNIE QVIKEPEHID 
DTSSDLVLSA HLQEQEVKEY SLHERELSQN TVIEIESAVE KTDIFIEEDT TYQAINKEQR
EETTITSVKE VIPQEQEKTA ENGFFSRLVK GLLKTKQNIG IGFRSLFLGK KIDDELFEEL
EEQLLIADIG VPTTTKIINN LIQHASRKQL QEADLLYQQL KVELADILKP VEQPLQLDNS
KKPYVILMVG VNGVGKTTTI GKLANQFQRQ GKSVMLAAGD TFRAAAVEQL QVWGERNQIP
VIAQSTGSDS ASVIFDAMQS AVARNIDVLI ADTAGRLQNK NNLMDELKKI VRVIKKCDET
APHEIMLTLD SGTGQNAISQ AKLFNEAVGL TGISLTKLDG TAKGGVIFAI ADQFNLPIRY
IGVGEKIDDL RPFQADEFID ALFIQEE