Gene HS_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0390 
SymbolleuC 
ID4239866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp414939 
End bp416348 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content42% 
IMG OID638103933 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_718600 
Protein GI113460536 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CACTCTACCA AAAATTATTT GATTCTCATA TTGTACATGA AGCACCAGGA 
GAAGTACCGA TTTTGTACAT TAATCGTCAT TTAATTCATG AAGTCACTTC ACCGCAAGCC
TTTGATGGTT TACGTGTAGC AGGTCGTCAG GTTCGTCAAG TGAATAAAAC TTTCGGCACA
ATGGATCATA GTATTTCTAC TCAAGTGCGT GACGTAAACA AATTAACAGG GCAAGCGAAA
ATTCAGGTTT TAGAGCTAGA TAAAAATTGT AAAGCAACAG GAATTTCTTT GTTTGATATG
AACAGTAAAC AGCAAGGCAT TGTACATGTT ATGGGGCCGG AACAAGGATT AACCTTACCG
GGCATGACGA TTGTTTGCGG TGATTCCCAT ACGGCAACTC ATGGGGCTTT CGGTGCATTA
GCTTTTGGTA TCGGTACATC GGAAGTGGAA CATGTTCTTG CAACGCAAAC ACTAAAACAA
GCCAGAGCCA AAAGTATGAA AATTGAAGTA CGTGGCGAAG TCGCAAAAGG CATTACTGCC
AAAGATATTA TTCTTGCCAT TATCGGTAAA ACCACAATGG CAGGGGGAAC CGGTCATGTT
GTTGAGTTTT GTGGTGAAGC TATTCGTGCA TTGTCAATGG AAGGACGAAT GACAGTTTGC
AATATGGCAA TTGAAATGGG GGCAAAAGCC GGACTGATTG CACCTGATGA AACCACATTC
GCTTATTTGA AAGATCGTCC TTATGCACCG AAAGGAAAAG ACTGGGAAAG TGCGGTAGAA
TATTGGAAAA CCTTAAAAAC CGATGAAGGT GCAGAGTTTG ATACTGTGGT GATATTAGAC
GCAAAAGACA TTGCTCCACA AGTAACATGG GGAACCAATC CAGGTCAGGT TATCGGTATT
GATCAGAAAG TACCTAATCC GGCAGAAATG CAAGATCCCG TCACCAAAGC CTCCGCAGAA
AAAGCCTTAG CTTATATTGG TTTATCTCCG GAAACTGATT TAAAAGATAT TTCCGTTGAT
CAAGTATTTA TCGGATCTTG CACCAATTCC CGCATTGAAG ATTTGCGTGC GGCAGCTACA
GTAATGAAAG GTCGAAAAAA AGCAGATAAC GTAAAACGAG TACTTGTTGT TCCCGGCTCA
GGATTGGTCA AAGAACAAGC AGAAAAAGAA GGGCTAGATA AAATTTTTAT TGCGGCTGGT
GCTGAATGGC GTAATCCCGG TTGTTCTATG TGTTTGGGTA TGAATGATGA TCGACTTGGT
GAATGGGAGC GTTGTGCTTC GACCAGTAAT CGTAATTTTG AAGGGCGACA AGGCCGTAAC
GGACGAACCC ATCTTGTAAG TCCGGCAATG GCAGCGGCAG CAGCTGTCTT CGGTAAATTT
GTTGATATTC GTTATATGGA ATTAAATTAA
 
Protein sequence
MKKTLYQKLF DSHIVHEAPG EVPILYINRH LIHEVTSPQA FDGLRVAGRQ VRQVNKTFGT 
MDHSISTQVR DVNKLTGQAK IQVLELDKNC KATGISLFDM NSKQQGIVHV MGPEQGLTLP
GMTIVCGDSH TATHGAFGAL AFGIGTSEVE HVLATQTLKQ ARAKSMKIEV RGEVAKGITA
KDIILAIIGK TTMAGGTGHV VEFCGEAIRA LSMEGRMTVC NMAIEMGAKA GLIAPDETTF
AYLKDRPYAP KGKDWESAVE YWKTLKTDEG AEFDTVVILD AKDIAPQVTW GTNPGQVIGI
DQKVPNPAEM QDPVTKASAE KALAYIGLSP ETDLKDISVD QVFIGSCTNS RIEDLRAAAT
VMKGRKKADN VKRVLVVPGS GLVKEQAEKE GLDKIFIAAG AEWRNPGCSM CLGMNDDRLG
EWERCASTSN RNFEGRQGRN GRTHLVSPAM AAAAAVFGKF VDIRYMELN