Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0390 |
Symbol | leuC |
ID | 4239866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 414939 |
End bp | 416348 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638103933 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_718600 |
Protein GI | 113460536 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA CACTCTACCA AAAATTATTT GATTCTCATA TTGTACATGA AGCACCAGGA GAAGTACCGA TTTTGTACAT TAATCGTCAT TTAATTCATG AAGTCACTTC ACCGCAAGCC TTTGATGGTT TACGTGTAGC AGGTCGTCAG GTTCGTCAAG TGAATAAAAC TTTCGGCACA ATGGATCATA GTATTTCTAC TCAAGTGCGT GACGTAAACA AATTAACAGG GCAAGCGAAA ATTCAGGTTT TAGAGCTAGA TAAAAATTGT AAAGCAACAG GAATTTCTTT GTTTGATATG AACAGTAAAC AGCAAGGCAT TGTACATGTT ATGGGGCCGG AACAAGGATT AACCTTACCG GGCATGACGA TTGTTTGCGG TGATTCCCAT ACGGCAACTC ATGGGGCTTT CGGTGCATTA GCTTTTGGTA TCGGTACATC GGAAGTGGAA CATGTTCTTG CAACGCAAAC ACTAAAACAA GCCAGAGCCA AAAGTATGAA AATTGAAGTA CGTGGCGAAG TCGCAAAAGG CATTACTGCC AAAGATATTA TTCTTGCCAT TATCGGTAAA ACCACAATGG CAGGGGGAAC CGGTCATGTT GTTGAGTTTT GTGGTGAAGC TATTCGTGCA TTGTCAATGG AAGGACGAAT GACAGTTTGC AATATGGCAA TTGAAATGGG GGCAAAAGCC GGACTGATTG CACCTGATGA AACCACATTC GCTTATTTGA AAGATCGTCC TTATGCACCG AAAGGAAAAG ACTGGGAAAG TGCGGTAGAA TATTGGAAAA CCTTAAAAAC CGATGAAGGT GCAGAGTTTG ATACTGTGGT GATATTAGAC GCAAAAGACA TTGCTCCACA AGTAACATGG GGAACCAATC CAGGTCAGGT TATCGGTATT GATCAGAAAG TACCTAATCC GGCAGAAATG CAAGATCCCG TCACCAAAGC CTCCGCAGAA AAAGCCTTAG CTTATATTGG TTTATCTCCG GAAACTGATT TAAAAGATAT TTCCGTTGAT CAAGTATTTA TCGGATCTTG CACCAATTCC CGCATTGAAG ATTTGCGTGC GGCAGCTACA GTAATGAAAG GTCGAAAAAA AGCAGATAAC GTAAAACGAG TACTTGTTGT TCCCGGCTCA GGATTGGTCA AAGAACAAGC AGAAAAAGAA GGGCTAGATA AAATTTTTAT TGCGGCTGGT GCTGAATGGC GTAATCCCGG TTGTTCTATG TGTTTGGGTA TGAATGATGA TCGACTTGGT GAATGGGAGC GTTGTGCTTC GACCAGTAAT CGTAATTTTG AAGGGCGACA AGGCCGTAAC GGACGAACCC ATCTTGTAAG TCCGGCAATG GCAGCGGCAG CAGCTGTCTT CGGTAAATTT GTTGATATTC GTTATATGGA ATTAAATTAA
|
Protein sequence | MKKTLYQKLF DSHIVHEAPG EVPILYINRH LIHEVTSPQA FDGLRVAGRQ VRQVNKTFGT MDHSISTQVR DVNKLTGQAK IQVLELDKNC KATGISLFDM NSKQQGIVHV MGPEQGLTLP GMTIVCGDSH TATHGAFGAL AFGIGTSEVE HVLATQTLKQ ARAKSMKIEV RGEVAKGITA KDIILAIIGK TTMAGGTGHV VEFCGEAIRA LSMEGRMTVC NMAIEMGAKA GLIAPDETTF AYLKDRPYAP KGKDWESAVE YWKTLKTDEG AEFDTVVILD AKDIAPQVTW GTNPGQVIGI DQKVPNPAEM QDPVTKASAE KALAYIGLSP ETDLKDISVD QVFIGSCTNS RIEDLRAAAT VMKGRKKADN VKRVLVVPGS GLVKEQAEKE GLDKIFIAAG AEWRNPGCSM CLGMNDDRLG EWERCASTSN RNFEGRQGRN GRTHLVSPAM AAAAAVFGKF VDIRYMELN
|
| |