Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0259 |
Symbol | tolQ |
ID | 4239775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 256926 |
End bp | 257609 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638103796 |
Product | biopolymer transport protein |
Protein accession | YP_718467 |
Protein GI | 113460405 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0316714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCTG AATTAGATTT TTTAGAATTA TTTTTAAAGG CTAGTATTGT TGTACAAATT GTCATTGTCA TATTAATATC TTTTTCGATT ATATCGTGGG CGATTATTAT CCAACGTAGT CGCATTTTAA CTCGAGCATT AAAGGACAGC ACACTTTTTG AAGAACGTTT TTGGTCTGGA GAAGATTTGT ATAAATTATA TGATGGACTT TCTAATCGTC GTAATGGTCT AAACAGCAGT GAGCGAATTT TTTATGTTGG ATTTAAGGAG TTTAATCGTC TGAAACAAGC TAATCCGGAT GCCCCTGAAG CCATTATTCA AGGCAGTTCT AGAGCCATGA ATTTAGCAAT GAATCGTGAG GTGGAAGATT TGGAAACACG AGTTCCATTT TTGGCAACTG TTGCGTCTAT TAGTCCATAC ATCGGCTTAT TTGGTACAGT ATGGGGAATT ATGCATGCTT TTATGGCATT AAGTGGTGCC AAACAAGCAA CATTACAGAT GGTTGCCCCG GGGATTGCTG AGGCTTTAAT TGCAACGGCT ATTGGTTTAT TTGCTGCTAT TCCAGCTGTA ATGGCTTACA ATCGTTTAAG TCTACGTGTG AATAAATTAG AGCAAAATTA TGCTAACTTC ATTGATGAAT TTACGACAAT TTTACATCGT CAAGCATTTG GTAAAAATCA TTAA
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Protein sequence | MTAELDFLEL FLKASIVVQI VIVILISFSI ISWAIIIQRS RILTRALKDS TLFEERFWSG EDLYKLYDGL SNRRNGLNSS ERIFYVGFKE FNRLKQANPD APEAIIQGSS RAMNLAMNRE VEDLETRVPF LATVASISPY IGLFGTVWGI MHAFMALSGA KQATLQMVAP GIAEALIATA IGLFAAIPAV MAYNRLSLRV NKLEQNYANF IDEFTTILHR QAFGKNH
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