Gene HS_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0222 
Symbol 
ID4239737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp222663 
End bp223385 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content41% 
IMG OID638103758 
Producthypothetical protein 
Protein accessionYP_718429 
Protein GI113460368 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00354115 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAT TTTTACTTCA TCTTACGCCG ATTGCAATCA TTCATACGCC GTATAAAGAA 
AAATTTTCCG TCCCTCGGCA AGCGAATTTA GTTCAAGACG GGACAGGTAT TGTAGAGTTG
CTTCCGCCGT TTAATTGTCC GGAGGCTGTA CGTGGACTGG AGCAGTTTTC TCATTTGTGG
TTAATTTTTC AATTTGACAA CGTGCCGACA GGTAAATGGC AACCTACAGT ACGACCTCCC
CGTTTAGGAG GTAATGAGCG TATTGGTGTT TTTGCTTCCA GAGCAACGCA TCGCCCAAAT
CCTTTGGGGT TATCTAAAGT GGAACTTCGT GAAGTTGAAT ATAAAAACGG AAAGATTTTG
TTACATCTCG GTTCAGTCGA TTTGATTGAC GGTACACCAA TTTTAGATAT TAAACCTTAT
ATTGCGTATG CGGATAATGA ACCCTGTGCA AGATCGGGAT TTGCCCAAGA AAAGCCCGAG
CAGGAATTGC GAGTGGAATT TAGTCCTGAG GTGCAAATAG TATTAGCAAA ATTAGAGAAA
AAACGACCGC ACTTAAGCCG TTTTATTCGA GAGGTTATTC AGCAAGATCC TCGACCTGCC
TATCAGAAAG GAAAAAATTT GCATAAAATT TATGGTATGG CACTGTATGA ATTTAATGTT
CGTTGGAGAA TTAAACATGA TGATGTTACA GTGGCGGAAG TGATTGAGAT TCAGCATGTT
TGA
 
Protein sequence
MSKFLLHLTP IAIIHTPYKE KFSVPRQANL VQDGTGIVEL LPPFNCPEAV RGLEQFSHLW 
LIFQFDNVPT GKWQPTVRPP RLGGNERIGV FASRATHRPN PLGLSKVELR EVEYKNGKIL
LHLGSVDLID GTPILDIKPY IAYADNEPCA RSGFAQEKPE QELRVEFSPE VQIVLAKLEK
KRPHLSRFIR EVIQQDPRPA YQKGKNLHKI YGMALYEFNV RWRIKHDDVT VAEVIEIQHV