| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0198 |
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| Symbol | dnaE |
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| ID | 4239713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 180055 |
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| End bp | 183531 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638103734 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_718405 |
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| Protein GI | 113460344 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAGC CTCGTTTTGT ACATTTGCGT GTACACAGTG ATTTTTCCAT GATTAACGGC
ATTACTAAGG TAAAACCTTT GATAAAAGCC TGTGTGCAAC ATGAAATGGT GGCAATGGCA
TTGACTGATT TTACTAACTT TTGTGGCTTA GTTCGTTTTT ATGGTGAAGC ACAATCTTCA
GGCGTTAAGC CTATTATCGG TGCTGATGTT CTCGTGAAAA GTGATTTGTT GGGAGATGAA
CTTTTTGAAC TGACGTTATT AGCCAAAAAT AACGAGGGTT ATCATAATAT TACCTTATTA
CTTTCGAAGG CTTATGAACG TGGTTATTAT AATTTACCTT ACATTGATCA GTCTTGGTTG
GCAGAACATC ATGAGGGAAT TATCATTTTA TCCGGTGGTC GCAATGGCGA TGTAGGGAAA
AAATTACTGA AAAATAATTC TGCTGATGTG GAAACTGCGG TAGCTTTTTA TCAAGAATAT
TTTCCCGACC ACTTTTATTT AAGTTTAAGT CGCACCGGTC GATCCGATGA AGATCGCTAT
ATTCAATCTG CTTTAATACT TGCACAGCAA AAACAATTAC CTTTAGTAGC AACAAATGAT
GTGTGTTTTT TAAGTCCGGA GGATTTTGAG GCACATGAAA TCCGAGTGGC TATCCATGAT
GGTTATACAC TGGATGATCC GAAACGCCCG AAATTATACA GTTCACAACA ATATTTCCGC
TCGGAGCAAG AAATGTGTGA GCTGTTTGCT GATATTCCTA CCGCACTTGA AAATACTGTA
TTAATAGCAC AACGTTGTAA TGTCACCATT CGTTTGGGGA CTTATTTTTT ACCGAAATTT
CCAACGGGTG ACTTAAGTCC GGAAGATTTT TTAATCCAAA AATCGAAAGA GGGATTAGAG
GAGCGTTTGC AGACCCTGTT TCCTGATCCG CAAGTGCGGT CGGAAAAACG TAAAGAATAC
GATGATCGCT TACAAACCGA ACTGGATGTC ATTAATAAAA TGGGCTTTCC CGGTTATTTT
TTGATCGTGA TGGAGTTTAT TCAGTGGTCA AAAGATAATG ATATTCCTGT AGGACCAGGA
CGTGGTTCCG GAGCAGGTTC TTTAGTCGCC TATGCGTTAA AAATTACCGA TTTGGATCCT
CTTGAATTTG ATTTGCTTTT TGAGCGTTTT CTCAATCCTG ACCGTGTTTC TATGCCGGAT
TTTGATGTGG ATTTCTGTAT GGACAAGCGA GATCGTGTGA TTGAGCATGT TGCAGAAACT
TATGGGCGTG GAGCGGTTTC GCAAATCATC ACATTTGGAA CAATGGCGGC AAAAGCGGTT
ATTCGTGATG TGGGGCGTGT ATTGGGACAC CCTTATGGTT TTGTGGATCG TATTGCTAAA
TTAATTCCCG CCGATCCAGG TATGACCTTG ACAAAGGCTT TTGAGGTAGA ACCGAGATTA
TCCGAAATTT ATAACAATGA TGAAGAAGTG AAAGCCTTAA TTGATATGGC AAGAAAATTG
GAGGGAGTAA CACGTAATGC GGGTAAACAT GCGGGCGGTG TAGTTATTTC TCCTAGTTTA
ATTACAGATT TCTCACCTCT ATATTGCGAC TCGGAAGGGA AACATCCTGT TACACATTTT
GATAAAAATG ATGTTGAATA TGCAGGATTA GTGAAATTTG ACTTTTTAGG CTTACGCACG
CTGACCATTA TTAAATGGGC ATTGGATATG ATTAACGCTC GTTTAGTTAA AGAGGGTAAA
AGTGCGGTAG ATATTTCGAC AATTCCTTTA AATGATCCCG ATTCATTTAA CTTGTTGAAA
AAAGCTGAAA CCACAGCAGT CTTCCAGCTG GAGTCGAGGG GAATGAAAGA TCTTATCAAG
AAACTTCAGC CCGACTGTTT TGAGGATATT ATTGCACTTG TAGCATTATT CCGCCCCGGT
CCTTTAGAGT CTGGAATGGT GCAAAACTTT ATCGATCGTA AACACGGAGT GGAACCTGTT
TCTTATCCTG ATGTTAAGTA TCAACATGAA TCCCTTAAGC CGATTTTAGA ACCTACCTAT
GGGGTTATTG TTTATCAAGA ACAAGTCATG CAAATTGCAC AAGTACTGGC GGGATACAGC
CTTGGCGGTG CGGATTTATT GCGTAGAGCG ATGGGTAAGA AAAAACCTGA AGAAATGGCG
GCACAACGAG ATATTTTTGA AAAAGGTGCG ATAGCAAAAG GGATTGATGG CGATTTAGCC
ATGAAAATCT TTGACTTAGT GGAAAAATTC GCCGGTTATG GTTTTAATAA ATCTCATTCT
GCCGCTTATG CTTTGGTTTC TTATCAAACC CTTTGGTTAA AAACACATTA TCCCGCTGAA
TTTATGGCAG CGGTGATGAC CTCAGAGATG GATAACACAG ACAAGATCGT GAGCTTTTAT
GATGAGTGTT TACGTATGGG TCTTACTATT GTTCCCCCTG ATATTAATAC AGGCAAACAT
CATTTTAGTG TGAATGATAA TGGTGAAATT GTTTATGGTA TTGGTGCGAT AAAAGGCGTT
GGAGAAGTCC CAATAAATGC AATAGTTTCA GCCCGTGAAC AAGGCGGAAT TTTTAAAGAT
TTATTCGATC TTTGTGCAAG GGTCGATTTA AAAAAAGTTA ATCGTCGCAC CTTTGAAAAT
CTAATTAAAT CCGGTGCATT TGATAAATTG GGTCCACATC GAGCCGCACT TGCCCAAAAT
TTAGAAGATG CGTTGAAAGC ATCGGATCAG CATGCAAAAG ATGAGGCGAT AGGACAGGTT
GATATGTTTG GTGTACTAAC TTCAAGCCAT GAAGATGTTG AAACCGCTTA TGCACACACG
CCACGTTGGA GCGAGAAACA AATTTTAGAC GGTGAGCGTG AAACATTAGG TTTGTATTTA
AGCAGTCATC CGATTACTCG TTATTTAAAA GAGTTGTCTC ATTACAGTTC AACACGTTTA
AATGAGTTAT CTCCAAACAC TCGAGGCAAA ATAAGTACTG TTTGCGGTTT AATTGTAGCA
TTAAGATTTG CAGTGACGAA AAAAGGAAAC CGATTAGGTA TTGCAACTTT AGATGACCGT
TCTGGGCTTT TAGATATAAC GTTGTTTGCT GATGCTTTAG AACGCTTTGG TGATAAATTA
CAGAAGGATA CCGTTGTTAT TGTTTCCGGT ACAGTCAGTT TTGATGATTT TTCTCAAGGG
CTAAAAATGT CTGTACGAGA GTTAATGACT TTAGATGAAG CTCGTAGTCG TTATGCAAAA
AATTTAGCCA TCAGCTTATC CCAAGAGCAA ATAACACCGC ACTTTATTCG CCAACTCAAA
GGAATTATTG AACCTTTTAG CGGCGGTTCT TTGCCAATAC ATCTTTACTA TCAAAGTAAA
GACGGACGAG CTTTGATACG CTTCGGTGTG CAATGGTCTG TTTATCCAAC AGATGAGTTA
TTGAGTGCAC TGGTAACAAT GTTAGGAGAA AATGCGGTTG AGCTTGAATT TGACTAA
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| Protein sequence | MSQPRFVHLR VHSDFSMING ITKVKPLIKA CVQHEMVAMA LTDFTNFCGL VRFYGEAQSS
GVKPIIGADV LVKSDLLGDE LFELTLLAKN NEGYHNITLL LSKAYERGYY NLPYIDQSWL
AEHHEGIIIL SGGRNGDVGK KLLKNNSADV ETAVAFYQEY FPDHFYLSLS RTGRSDEDRY
IQSALILAQQ KQLPLVATND VCFLSPEDFE AHEIRVAIHD GYTLDDPKRP KLYSSQQYFR
SEQEMCELFA DIPTALENTV LIAQRCNVTI RLGTYFLPKF PTGDLSPEDF LIQKSKEGLE
ERLQTLFPDP QVRSEKRKEY DDRLQTELDV INKMGFPGYF LIVMEFIQWS KDNDIPVGPG
RGSGAGSLVA YALKITDLDP LEFDLLFERF LNPDRVSMPD FDVDFCMDKR DRVIEHVAET
YGRGAVSQII TFGTMAAKAV IRDVGRVLGH PYGFVDRIAK LIPADPGMTL TKAFEVEPRL
SEIYNNDEEV KALIDMARKL EGVTRNAGKH AGGVVISPSL ITDFSPLYCD SEGKHPVTHF
DKNDVEYAGL VKFDFLGLRT LTIIKWALDM INARLVKEGK SAVDISTIPL NDPDSFNLLK
KAETTAVFQL ESRGMKDLIK KLQPDCFEDI IALVALFRPG PLESGMVQNF IDRKHGVEPV
SYPDVKYQHE SLKPILEPTY GVIVYQEQVM QIAQVLAGYS LGGADLLRRA MGKKKPEEMA
AQRDIFEKGA IAKGIDGDLA MKIFDLVEKF AGYGFNKSHS AAYALVSYQT LWLKTHYPAE
FMAAVMTSEM DNTDKIVSFY DECLRMGLTI VPPDINTGKH HFSVNDNGEI VYGIGAIKGV
GEVPINAIVS AREQGGIFKD LFDLCARVDL KKVNRRTFEN LIKSGAFDKL GPHRAALAQN
LEDALKASDQ HAKDEAIGQV DMFGVLTSSH EDVETAYAHT PRWSEKQILD GERETLGLYL
SSHPITRYLK ELSHYSSTRL NELSPNTRGK ISTVCGLIVA LRFAVTKKGN RLGIATLDDR
SGLLDITLFA DALERFGDKL QKDTVVIVSG TVSFDDFSQG LKMSVRELMT LDEARSRYAK
NLAISLSQEQ ITPHFIRQLK GIIEPFSGGS LPIHLYYQSK DGRALIRFGV QWSVYPTDEL
LSALVTMLGE NAVELEFD
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