Gene HS_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0141 
SymbolslmA 
ID4239650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp126734 
End bp127393 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content36% 
IMG OID638103671 
Productnucleoid occlusion protein 
Protein accessionYP_718346 
Protein GI113460287 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.102052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAC AGCAATTGGA TATTGGCGAT GCTGAAATCG TTGTTGCCTC AAAACAAAAA 
ACGCAAAAAA TTGAGAAACG AACAGTAAAA GAACGTCGTC AACAGGTATT AACCGTACTA 
ACCCATATGT TACATTCAGA ACGAGGAATG GAGCGTATGA CGACAGCTCG CTTGGCACAG 
GAAGTCGGTG TTTCTGAAGC CGCACTTTAC CGTTATTTTC CCAGTAAAAC CAAAATGTTT 
GAAGCATTAT TGGATAATAT AGAAAATACT TTATTTAGTC GAATTAATCA CTCTATCAAG 
AACGAAACCA ATACCATGAA TCGTGTGAGA GATATTTTGC AAACTATTCT TGATTTTGCA 
CGAAAAAATC CGGGATTAAC CCGAATTTTA ACAGGGCATG CTTTAATGTT TGAAGATAGT 
CAGTTACAAG CACGAGTTGC ACGATTTTTT GATCGTTTAG AATTACAGTT TGTGAATATT 
CTACAAATGC GTAAATTGAG AGAAGGAAAA TCTTTTCATC TTGATGAAAA AATTATTGCT 
TCCCATCTTG TTACTTTATG CGAGGGACAG TTTATGCGTT ACGTAAGAAA TAACTTTAGG 
CACTTGCCTA ATCAAGGCTT TGAGCAACAA TGGAAACTGC TGGAAAGTTT ATTTGCATAA
 
Protein sequence
MEQQQLDIGD AEIVVASKQK TQKIEKRTVK ERRQQVLTVL THMLHSERGM ERMTTARLAQ 
EVGVSEAALY RYFPSKTKMF EALLDNIENT LFSRINHSIK NETNTMNRVR DILQTILDFA 
RKNPGLTRIL TGHALMFEDS QLQARVARFF DRLELQFVNI LQMRKLREGK SFHLDEKIIA 
SHLVTLCEGQ FMRYVRNNFR HLPNQGFEQQ WKLLESLFA