Gene HS_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0108 
Symbolfab 
ID4239616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp98654 
End bp99892 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content44% 
IMG OID638103637 
Product3-oxoacyl-[acyl-carrier-protein] synthase II 
Protein accessionYP_718312 
Protein GI113460254 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAGTCA CAGGAATTGG CGGTATCACT GCTTTTGGGA ATGATTGGCA GAAGATAAAA 
ACAGCTTTTC AACGTAAACA AAATGCCGTC AAATCTATGA ATGATTGGGT TGAACGTTTT
CCCGAATTGG ATGCTCGTTT AGGTGCGGTT ATTGAGGATT ACTATCCTCC GAAACATTGG
AACCGTAAGC AATTACGCAG TTTAGGGCGT GTTTCTCAGC TCGTAGTTGA TGCCAGTGAG
CGAGCCTTGG CTAACGCTTC TTTATTGGAC GAAGACGGTA TTATTTTGGA ATATTTGAAA
GACGGTAGAA TGGGTGTGGC TTGCGGTTCT TCTACCGGTT CTACTAATGA TATTAAAGAT
GCGGCAGAAC TTTTGATGAC CGGTAAGTCA GACGGTTTCA ACGCCAACAC TTATGTACGT
ATGATGCCAC ATACCACTGC GGCAAATATC GGCATTTTCT TTGGCTTAAC AGGGCGGATT
ATTCCCACTT CAAGTGCTTG TTCATCAGGT AGTCAGGCGA TCGGCTATTC CTATGAAGCC
ATTAAATACG GATTGATTCC TATGATGCTT GCTGGCGGTG GTGAAGAATT TTGTCCGTCA
GAGGTTTATG TTTTCGACAG CCTTTATGCG GCAAGTCGTA ATAATGACAA TCCAAGCCAT
ACGCCACGTC CATACGATAA AGCACGTGAC GGATTAGTGA TTGGCGAGGG CGGTTGTATG
TTTGTGTTGG AAGAGCTTGA GCATGCATTA GCTCGTGGAG CGAATATTAT TGCCGAAGTG
GTCGGTTATG GTGCAAATAG TGACGGTAGT CATGTTACCC GCCCGCAAAA AGAGACGATG
CAGCGTTGTA TGGAATTAGC CCTGAAAGAT GCAGGGATTG AACCGAGTAA AATTGGTTAT
GTCAGTGGGC ATGGTACCGC TACCGAACAA GGCGATATTG CGGAAACGCT GGCGACAGAA
GCCGTATTTG GGTATGTTCC CATGAGTTCT CAAAAAAGTT ATCTTGGTCA TACGTTGGGA
GCTTGTGGTG CATTAGAGAG CTGGTTTAGC ATTGAAATGA TGCGAGATGG CTGGTTTGCA
CCAACGATTA ATCTTGACAA TGTAGATGAG CGTTGTGGTA AGGTGGATTA TATTCAACAT
GATGGACGAG AAATTCATAC TGATTATGTC ATGAACAATA ATTTCGCATT TGGTGGGGTG
AATACTTCTC TTATTTTTAA ACGCTGGACG GATGAATAG
 
Protein sequence
MVVTGIGGIT AFGNDWQKIK TAFQRKQNAV KSMNDWVERF PELDARLGAV IEDYYPPKHW 
NRKQLRSLGR VSQLVVDASE RALANASLLD EDGIILEYLK DGRMGVACGS STGSTNDIKD
AAELLMTGKS DGFNANTYVR MMPHTTAANI GIFFGLTGRI IPTSSACSSG SQAIGYSYEA
IKYGLIPMML AGGGEEFCPS EVYVFDSLYA ASRNNDNPSH TPRPYDKARD GLVIGEGGCM
FVLEELEHAL ARGANIIAEV VGYGANSDGS HVTRPQKETM QRCMELALKD AGIEPSKIGY
VSGHGTATEQ GDIAETLATE AVFGYVPMSS QKSYLGHTLG ACGALESWFS IEMMRDGWFA
PTINLDNVDE RCGKVDYIQH DGREIHTDYV MNNNFAFGGV NTSLIFKRWT DE