Gene HS_0077 details

Gene Information

• Locus tag: HS_0077
• Symbol: rpsE
• ID: 4239585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 74017
• End bp: 74517
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638103608
• Product: 30S ribosomal protein S5
• Protein accession: YP_718283
• Protein GI: 113460226
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0793538
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGCA TCGAAAAACA AACTGGTGAA CTGCAAGAGA AGCTAATCGC GGTAAACCGT 
GTATCAAAAA CTGTAAAAGG TGGTCGTATT ATGAGCTTTA CTGCTTTGAC AGTAGTAGGT 
GATGGTAACG GTCGAGTAGG TTTTGGTTAT GGTAAAGCGC GCGAAGTTCC GGCAGCTATC 
CAAAAAGCGA TGGAAAAAGC ACGTCGCAAT ATGATTACTG TGGCTTTAAA TGAAGGCACA 
TTACAGCATC CAATTAAAGG TTCTCACACT GGTTCTCGCG TATTTATGCA ACCAGCAAGT 
GAAGGTACGG GTATCATCGC TGGTGGTGCT ATGCGTGCTG TATTGGAGGT TGCGGGTGTT 
CGTAACGTTC TTTCTAAAGC ATATGGTTCA ACCAACCCAA TTAACGTTGT TCGTGCAACT 
ATTGATGCAT TAGCAAATAT GAAATCACCA GAAATGGTTG CTGCCAAACG TGGCAAAACC 
GTTGATGAAA TCTTGGGGTA A 

 

Protein sequence

MASIEKQTGE LQEKLIAVNR VSKTVKGGRI MSFTALTVVG DGNGRVGFGY GKAREVPAAI 
QKAMEKARRN MITVALNEGT LQHPIKGSHT GSRVFMQPAS EGTGIIAGGA MRAVLEVAGV 
RNVLSKAYGS TNPINVVRAT IDALANMKSP EMVAAKRGKT VDEILG