Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0032 |
Symbol | |
ID | 4239540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 33722 |
End bp | 34696 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638103563 |
Product | sugar ABC transporter, permease |
Protein accession | YP_718238 |
Protein GI | 113460181 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.81353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGGAGGT TGTTTATGAA AATCACCAAT AATCATATTT TATCTACGAC AATTTTGATA CTGGCAACCT TATTAAGTCT ATTCACGAAT GACTTCGCTA CCATTGAGAA TATCTATGAT GTAGTCAATA ACTATTCAAT GCTAATGATT TTAGCTTGTG GGTTGTTTGT GGTGTTACTA TCAGGTGGCA TTGACATCTC ATTTCCTGCT ATCACCATTA TTTCACAATA CATTATGGTA ACGGCTATAG GCAAATATGA TATCGGTTTT TTCGGCGTAT TTGCAGTATC ATCCGCAATA GGTATCTTAC TTGGTTTTAT TAATGCTCTT TTTGTAAACC GCCTTAGTGT ACCTTCAATT ATTATCACCA TCTCAACATT AAATATTTTC TACGGAGGAC TACTCTATTT TACCAAGGGT GTTTGGTTAT ACGATTACCC TGAATGGTTC ACCCAAGAAT TGCTATTTTT CAAACAAACC TCGCAAGATG GTTTTGAATT CGGTTTATCT TTTCAAGCGA TAATGGCGAT TTTATCTATA TTATTAACTT GGTTGATCAC TAGCAGGTTA ACAATAGGAA GAAAAATTTA TGCCCTTGGT GGAAACCAAG ATGCCACCTC TCGTATTGGT TTTAATATTT TATTCCTTCA CCTATTTGCT TACGGCTATA TGGGATTTAT GGCTGGAATA GCAGGAATTG TGCAATCTTA TACCGTACAG TCTGTTGCCC CTGACTCTCT ACTTGGTTAC GAATTAACTG TACTGGCAGC TGTTGTTTTA GGAGGTGCAA GTTTATCTGG AGGAAAAGGG ACATTATTTG GCACTGTAAT GGGAGTAATG TTACTAGCAA TTATTCAAAA TGGGCTGAAC CTTATGAATG TATCCTCATA TTGGCAAACG ATAATTACCG GTATCATTAT CATCTTAAGT ATTAGTGCTA CTGCATTAGG GCAATTGAAA AAACAAGGAG TATAA
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Protein sequence | MRRLFMKITN NHILSTTILI LATLLSLFTN DFATIENIYD VVNNYSMLMI LACGLFVVLL SGGIDISFPA ITIISQYIMV TAIGKYDIGF FGVFAVSSAI GILLGFINAL FVNRLSVPSI IITISTLNIF YGGLLYFTKG VWLYDYPEWF TQELLFFKQT SQDGFEFGLS FQAIMAILSI LLTWLITSRL TIGRKIYALG GNQDATSRIG FNILFLHLFA YGYMGFMAGI AGIVQSYTVQ SVAPDSLLGY ELTVLAAVVL GGASLSGGKG TLFGTVMGVM LLAIIQNGLN LMNVSSYWQT IITGIIIILS ISATALGQLK KQGV
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