Gene HS_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0032 
Symbol 
ID4239540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp33722 
End bp34696 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content36% 
IMG OID638103563 
Productsugar ABC transporter, permease 
Protein accessionYP_718238 
Protein GI113460181 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.81353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGAGGT TGTTTATGAA AATCACCAAT AATCATATTT TATCTACGAC AATTTTGATA 
CTGGCAACCT TATTAAGTCT ATTCACGAAT GACTTCGCTA CCATTGAGAA TATCTATGAT
GTAGTCAATA ACTATTCAAT GCTAATGATT TTAGCTTGTG GGTTGTTTGT GGTGTTACTA
TCAGGTGGCA TTGACATCTC ATTTCCTGCT ATCACCATTA TTTCACAATA CATTATGGTA
ACGGCTATAG GCAAATATGA TATCGGTTTT TTCGGCGTAT TTGCAGTATC ATCCGCAATA
GGTATCTTAC TTGGTTTTAT TAATGCTCTT TTTGTAAACC GCCTTAGTGT ACCTTCAATT
ATTATCACCA TCTCAACATT AAATATTTTC TACGGAGGAC TACTCTATTT TACCAAGGGT
GTTTGGTTAT ACGATTACCC TGAATGGTTC ACCCAAGAAT TGCTATTTTT CAAACAAACC
TCGCAAGATG GTTTTGAATT CGGTTTATCT TTTCAAGCGA TAATGGCGAT TTTATCTATA
TTATTAACTT GGTTGATCAC TAGCAGGTTA ACAATAGGAA GAAAAATTTA TGCCCTTGGT
GGAAACCAAG ATGCCACCTC TCGTATTGGT TTTAATATTT TATTCCTTCA CCTATTTGCT
TACGGCTATA TGGGATTTAT GGCTGGAATA GCAGGAATTG TGCAATCTTA TACCGTACAG
TCTGTTGCCC CTGACTCTCT ACTTGGTTAC GAATTAACTG TACTGGCAGC TGTTGTTTTA
GGAGGTGCAA GTTTATCTGG AGGAAAAGGG ACATTATTTG GCACTGTAAT GGGAGTAATG
TTACTAGCAA TTATTCAAAA TGGGCTGAAC CTTATGAATG TATCCTCATA TTGGCAAACG
ATAATTACCG GTATCATTAT CATCTTAAGT ATTAGTGCTA CTGCATTAGG GCAATTGAAA
AAACAAGGAG TATAA
 
Protein sequence
MRRLFMKITN NHILSTTILI LATLLSLFTN DFATIENIYD VVNNYSMLMI LACGLFVVLL 
SGGIDISFPA ITIISQYIMV TAIGKYDIGF FGVFAVSSAI GILLGFINAL FVNRLSVPSI
IITISTLNIF YGGLLYFTKG VWLYDYPEWF TQELLFFKQT SQDGFEFGLS FQAIMAILSI
LLTWLITSRL TIGRKIYALG GNQDATSRIG FNILFLHLFA YGYMGFMAGI AGIVQSYTVQ
SVAPDSLLGY ELTVLAAVVL GGASLSGGKG TLFGTVMGVM LLAIIQNGLN LMNVSSYWQT
IITGIIIILS ISATALGQLK KQGV