| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1343 |
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| Symbol | tgt |
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| ID | 8710041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1604897 |
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| End bp | 1606222 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646483428 |
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| Product | tRNA-guanine transglycosylase |
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| Protein accession | YP_003374525 |
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| Protein GI | 283783771 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.161378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTCTA ATAAAGTAAA TGCTATGACA AGTCTTCTTG AACATCCACG CGGAGCTGAG
CCTGGGAAGC CTGGTGACCG CAAAGAATTT TCGTTTACAA CTAAAACGCG ACTTTCCAAT
ACTGCTGAAG GTAAAGGTCG TGACGGTGCT CGCTATGGGC GCACCGGCGT AATTCACACG
CCTCACGGGG ATATTCAGAC CCCAGCATTT GTACCTGTTG CAACGCAAGC TGCAATGAAG
GCAGTGTTGC CAGAAAGCAT TAAGGATTTG GGCGCTCAGT GCATGCTTTC AAACGCTTTT
CATTTGTACG AACGTCCTGG GGCGGATGTT CTTGACGAAG CTGGCGGATT GGGAAAGTTT
ATGAACTGGG ATAAGCCAAC CTTTACGGAT TCTGGCGGTT TTCAGGTTCT TTCTTTGGGT
GCTGGTTTTA AGAAGACCCT TGCAATGGAC GTTACTGGCA TGAAGTCGGA CGATGTTATT
GCAGCCGGTA AGGAGCGTAT GGCTTTTGTT GACGAGGATG GCGTAACTTT TAAGTCTCCT
CTTAACGGAG CTAAGCACCG TTTTAGTGCT GAAATTTCTA TGGGAATCCA GCATAAGCTG
GGCGCGGATA TTATGTTTTC TTTCGACGAG CTTACTACTT TGATGAATAC TCGCCGATAT
CAAGAGGAAT CTGTAGAGCG CACTTTCCGC TGGGCAAAGC GTTGTGTTGC AGAGCATCAG
CGTTTAACCG AGGAGCGTGT AGGCAAGCCG TATCAAGCAT TGTATGGCGT TGTGCAGGGT
GCTAATTATG AGGATTTGCG TAGGCATGCG GCCGAGCAGA TTGCTTCTTT AGATTTTGAT
GGCGTAGGCA TTGGTGGCGC TATTGAGAAG CGAATTATTG GTGATACTTG CGCTTGGATT
TGCGATGCTA TGCCGGAAAA TCGCCCACGC CACGTGCTTG GTATTGCAGC CGTGGATGAT
ATTTTTGCTT GCGTTGAAAA CGGCGGAGAT ACTTTCGACT GCGTGGCTCC AGCTCGCTGC
GGAAGAAACG GAGCAATTTT TACTCGTCAT GGTCGCTACA ACGTAAAACG TGCAGAGTTT
AAGCATGATC AGCGTCCGCT TGAAGAAGGC TGCGATTGCT ACACTTGCAC GCATTATTCC
AGAATGTATG TGGATCATTT GTTGCGCGCT AGTGAAATGA ATGGATTTAC GCTTGCAACC
ATTCATAATG AGCGTTTCTT TGTGAAGCTG CTCGACGATA TTCGAGCTTC TATTGACGGC
GGATATTTTG AAGAGTTCCG CGATGAGACT CTTGCACACT ATTACGAAAA CGGTTCTAAA
GGCTGA
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| Protein sequence | MPSNKVNAMT SLLEHPRGAE PGKPGDRKEF SFTTKTRLSN TAEGKGRDGA RYGRTGVIHT
PHGDIQTPAF VPVATQAAMK AVLPESIKDL GAQCMLSNAF HLYERPGADV LDEAGGLGKF
MNWDKPTFTD SGGFQVLSLG AGFKKTLAMD VTGMKSDDVI AAGKERMAFV DEDGVTFKSP
LNGAKHRFSA EISMGIQHKL GADIMFSFDE LTTLMNTRRY QEESVERTFR WAKRCVAEHQ
RLTEERVGKP YQALYGVVQG ANYEDLRRHA AEQIASLDFD GVGIGGAIEK RIIGDTCAWI
CDAMPENRPR HVLGIAAVDD IFACVENGGD TFDCVAPARC GRNGAIFTRH GRYNVKRAEF
KHDQRPLEEG CDCYTCTHYS RMYVDHLLRA SEMNGFTLAT IHNERFFVKL LDDIRASIDG
GYFEEFRDET LAHYYENGSK G
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