| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1218 |
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| Symbol | secE |
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| ID | 8709402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1448502 |
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| End bp | 1448729 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646483306 |
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| Product | preprotein translocase, SecE subunit |
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| Protein accession | YP_003374412 |
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| Protein GI | 283783658 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000979518 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCGCAGG CACGCAGTAC TAAGAAAGCA GTAAAGCATA ACTTGTTCGT GCGTATTGGC
ATGTTCGTTA AGCAAACTAT TGACGAGACG CGCAAGGTTA TTGCACCTCA TGGCAAAGAG
TTGTTTGCTT GGTCGTCTGC AGTTTTCATA TTTGTTGTAT TTTTGATGGC TTTCGTCACC
TGCATGGACT TCGGTTTGGG TAAGTCCGTA ATGTGGCTGT TCGGCTGA
|
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| Protein sequence | MAQARSTKKA VKHNLFVRIG MFVKQTIDET RKVIAPHGKE LFAWSSAVFI FVVFLMAFVT
CMDFGLGKSV MWLFG
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