| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1119 |
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| Symbol | galE |
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| ID | 8709176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1288465 |
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| End bp | 1289475 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646483210 |
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| Product | UDP-glucose 4-epimerase |
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| Protein accession | YP_003374320 |
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| Protein GI | 283783566 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1087] UDP-glucose 4-epimerase |
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| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.368347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGTTC TTGTTACAGG TGGATGCGGA TACATTGGAG CACATGTAGT TCACGCTTTA
CATGAAACAA AGCAAAATGT CGTCGTCGTT GACGATTTAA GCTACGGAAA GCCTACAAGA
ATTGAAGGCG CACGTCTTTA TGGTATGGAT ATCTCTTCTC CTGATGCAGG AAAGCGACTT
GCGCAAATTA TGAAAGATGA GCACGTCGAT GCTGTAATTC ACTTTGCTGC TAGAAAGCAA
GTTGGAGAGT CCGTAGAAAA GCCACTTTGG TATTATCAAC AGAATATTAA CGGCATGCTT
AATGTGCTTG AAGGCATGAA AGATAGCGGA GTTAAGAAGC TCGTATTTTC TTCTTCTGCA
GCAACTTATG GAGTACCTCC TGTTGAAGTT GTACCAGAAG ATGTTGTGCC AATGTTGCCA
ATTAACCCTT ATGGTCAAAC CAAGCTTTTT GGCGAGTGGA TGGCACGTGC TTGCGAGCAC
ACATACGGAA TTCGCTTCTG CGCACTGCGT TACTTCAACG TAGCTGGATG CGGTCCGGTG
GAATTGGAAG ATCCTGCGAT TTTGAACTTA ATTCCTATGC TTCTTGACAG ACTACAGCGA
GGAAAAGCAC CTGCTATTTT TGGCGACGAC TATCCTACTG CTGATGGCAC TTGCATTCGC
GACTATATTC ACGTTTCTGA TTTAGCAGAC GCGCATATTG CGGCACTCAC GTATTTGGAT
CGCGACGAGC GCAAGTACGA TGCTTTTAAC GTAGGAACTG GTAAGGGCAC GTCTGTGCGC
GAAATTGTTG ACGAAGTGCG CAGAGTTACC GGTTTACCAT TTAAAGAAAC TGTTCTTGAT
CGCAGAGCTG GAGATCCTCC ACAGCTTATT GGCAGCACGA AGCGAATTAA CGAAGAAATG
GGATGGCATG CTCGCTACGA CGTTAAGGAT ATCGTAGAAT CTGCTTGGGC AGCTTGGCAG
GCAAATCCTG AGCATCATAT TGATGTTGAT TCGTGGAAGC AGCTTGACTA G
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| Protein sequence | MTVLVTGGCG YIGAHVVHAL HETKQNVVVV DDLSYGKPTR IEGARLYGMD ISSPDAGKRL
AQIMKDEHVD AVIHFAARKQ VGESVEKPLW YYQQNINGML NVLEGMKDSG VKKLVFSSSA
ATYGVPPVEV VPEDVVPMLP INPYGQTKLF GEWMARACEH TYGIRFCALR YFNVAGCGPV
ELEDPAILNL IPMLLDRLQR GKAPAIFGDD YPTADGTCIR DYIHVSDLAD AHIAALTYLD
RDERKYDAFN VGTGKGTSVR EIVDEVRRVT GLPFKETVLD RRAGDPPQLI GSTKRINEEM
GWHARYDVKD IVESAWAAWQ ANPEHHIDVD SWKQLD
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