Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_1101 |
Symbol | |
ID | 8709591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 1265534 |
End bp | 1266733 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646483192 |
Product | putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
Protein accession | YP_003374302 |
Protein GI | 283783548 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
TIGRFAM ID | [TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTG ATAATGCTAT TGAGCATGAA GTGCATATTG TTCTTGCAGG CGGGGGCACT GCAGGTCATG TCAATCCTTT GCTTTCTGTC GCAAACGCTA TTAAAAAGCT CAATCCTGAA GCGTTAATTA GTGTAATTGG CACAGAAGTT GGTTTGGAAA AAAGTCTTGT TCCGAATGCA GGGTACGAAC TTGACACTAT AGAAAAAGTG CCGTTCCCGC GTAAGCCAAA TCTAGATGCA ATTAAGTTTC CAATTCGATG GATGCGCGAA AAACGCAAAG TGCGAAATAT ACTAGCCGCT AGAAAAGCAG ATATAGTAGT GGGCTTCGGT GGCTATGCTT CTGCTCCAGT ATATTCTCAA GCTCATGCGC AGCATATTCC TATTGTGATT CACGAGCAGA ATGCTAAATC TGGAATGGCA AATCGCTTGG GCGCAAGTTG GGCTGATGCT GTTGGAACAG TTTATGGGAA TACTGATTTG CGCACACGAA AAGGTGTCAA AGTTGAAAGA GTTGGTTTAC CTCTTAGACC TGCTATTTCT CAATTGTGTG AAAGATTAGA AAAAGATTAT GATTCCGCTC GCGTTGAAGG TGCGCAAAAA CTTGGCGTTG ACCCTAAACG TCCAATTATT CTTGTTACTG GCGGATCTTT GGGTGCAAAA AGCATAAATC AAGCTGTTGC TGCAGCAGCA GGAGATATTT TAAAACATGC GCAAGTAATT CACTTAACTG GTCGCGCAAA AGCGGAAGAA GTACGAAATA TAGTTGCAAA GCAAGTAGGC GAATCGCAAA TAAATGATAT TAAACCAGAG CATGCTGGTT GTGGCGATTA TCATATTGCA GAATATTTAG AGCGTATTGA TTGGGCTTTT GCTTGTGCAG ATTTAGTTAT ATGTCGTGCA GGAGCTGGAA CGGTTGCAGA AATTTCTGCA CTTGGCTTAC CTGCTGTATA CGTGCCATTG CCTATTGGCA ACGGCGAGCA GCGTTTCAAT GTTGAGCCTG TAGTAAATGC AGGGGGAGCA TTAATGGTAA ATGATGCTGA TTTCAATGCG AAGTGGTTTA TAGATGAAGG ATTAGCTTTA TTGCAAAACA AAAAGCAATT ACAAGCTATG CGCACTAAAT CTTGGAATTA TGGTATTCGT GATGCTGCAG ACGTTATGGC GAAGCGTATT CTTGAAATCG CAAAAGAAGG CAGAAAGTAA
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Protein sequence | MKFDNAIEHE VHIVLAGGGT AGHVNPLLSV ANAIKKLNPE ALISVIGTEV GLEKSLVPNA GYELDTIEKV PFPRKPNLDA IKFPIRWMRE KRKVRNILAA RKADIVVGFG GYASAPVYSQ AHAQHIPIVI HEQNAKSGMA NRLGASWADA VGTVYGNTDL RTRKGVKVER VGLPLRPAIS QLCERLEKDY DSARVEGAQK LGVDPKRPII LVTGGSLGAK SINQAVAAAA GDILKHAQVI HLTGRAKAEE VRNIVAKQVG ESQINDIKPE HAGCGDYHIA EYLERIDWAF ACADLVICRA GAGTVAEISA LGLPAVYVPL PIGNGEQRFN VEPVVNAGGA LMVNDADFNA KWFIDEGLAL LQNKKQLQAM RTKSWNYGIR DAADVMAKRI LEIAKEGRK
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