| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1094 |
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| Symbol | |
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| ID | 8709395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1258028 |
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| End bp | 1259227 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646483185 |
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| Product | elongation factor Tu domain protein |
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| Protein accession | YP_003374295 |
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| Protein GI | 283783541 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGG AAAAGTACGA GCGTACTAAG CCGCATGTTA ACATTGGTAC CATTGGTCAC
GTTGATCACG GTAAGACTAC CTTGACCGCG GCTATTTCTA AGGTGCTGCA TGGCGAGTAT
CCAGATCTGA ACCCTCAGTA TGACTTCGAT CAGATTGATG CCGCTCCAGA AGAGAAGGAA
CGCGGCATTA CCATTAACAT CGCACACATC GAGTATCAGA CCGCTGAGCG TCACTACGCT
CACGTGGACG CTCCAGGCCA CGCTGATTAC GTGAAGAACA TGATCACCGG TGCTGCTCAG
ATGGATGGCG CAATCCTCGT GGTTGCTGCT ACCGATGGTC CTATGGCTCA GACCCGTGAG
CACGTTTTGC TCGCTAAGCA GGTCGGTGTC CCGAAGATCC TCGTTGCTTT GAACAAGTGC
GATATGGTTG ATGATCCAGA ACTTATCGAC CTCGTCGAAG AAGAGGTTCG TGACCTCCTC
GAAGAAAACG GCTTCGATCG CGACTGCCCA GTCATCCGCA CCTCTGCTTA CGGTGCTTTG
CACGATGACG CTCCAGATCA CGAGAAGTGG GTAGAGACCG TCAAGGAGCT CATGAAGGCT
GTTGATGAGT ACATCCCAAC CCCAACTCAC GATCTTGACA AGCCATTCTT GATGCCAATC
GAAGATGTGT TCACCATCTC CGGTCGTGGT ACCGTTGTCA CCGGTCGTGT TGAGCGTGGT
AAGCTCCCAA TCAACACCCC AGTTGAGATT GTTGGTTTGC GTCCAACTCA GACCACCACC
GTTACCTCCA TCGAGACCTT CCACAAGCAG ATGGATGAGG CCGAGGCTGG CGATAACACT
GGTCTTCTTC TCCGTGGTAT CAACCGTACC GACGTTGAGC GTGGTCAGGT TGTGGCTGCT
CCAGGTTCTG TGACCCCACA CACCAAGTTC GAAGGCGAAG TTTACGTCTT GACCAAGGAT
GAAGGTGGCC GTCACTCGCC GTTCTTCTCC AACTACCGTC CACAGTTCTA CTTCCGCACC
ACCGACGTCA CCGGCGTTAT CACCTTGCCA GACGGCGTTG AGATGGTTCA GCCAGGCGAT
CACGCAACCT TCACTGTTGA GTTGATCCAG GCAATCGCAA TGGAAGAGGG CTTGACCTTC
GCAGTTCGTG AAGGTGGTCG TACCGTTGGT TCCGGTCGTG TGACCAAGAT TCTTGCCTAG
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| Protein sequence | MAKEKYERTK PHVNIGTIGH VDHGKTTLTA AISKVLHGEY PDLNPQYDFD QIDAAPEEKE
RGITINIAHI EYQTAERHYA HVDAPGHADY VKNMITGAAQ MDGAILVVAA TDGPMAQTRE
HVLLAKQVGV PKILVALNKC DMVDDPELID LVEEEVRDLL EENGFDRDCP VIRTSAYGAL
HDDAPDHEKW VETVKELMKA VDEYIPTPTH DLDKPFLMPI EDVFTISGRG TVVTGRVERG
KLPINTPVEI VGLRPTQTTT VTSIETFHKQ MDEAEAGDNT GLLLRGINRT DVERGQVVAA
PGSVTPHTKF EGEVYVLTKD EGGRHSPFFS NYRPQFYFRT TDVTGVITLP DGVEMVQPGD
HATFTVELIQ AIAMEEGLTF AVREGGRTVG SGRVTKILA
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