| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1061 |
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| Symbol | |
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| ID | 8709050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1208628 |
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| End bp | 1208954 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646483153 |
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| Product | putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein |
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| Protein accession | YP_003374264 |
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| Protein GI | 283783510 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3077] DNA-damage-inducible protein J |
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| TIGRFAM ID | [TIGR02384] addiction module antitoxin, RelB/DinJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.142992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCA GCGCAACCGC AACCGCAACC CCAGCAGCAG CAAAAACCGC AGCGAAAACC
GCAAGCATCA ACGTGCGCGT CACCAAGGAT GTTAAAGCGC AAGCAGAAGA ATTATTCGCC
AGCTTCGGCA TAACTCTTAG CGAAGCAATC AACATGTTCT TACACAAATC ACTTATGGTA
GAAGGACTCC CCTTCGACTT AAAACAGCCA AAATACAATA AAGAAACAAT CGCCGCGTTT
AAGGAATACG ACTACATGAA AGCACATCCA GAAGAGTACA AGCGCTACGA CAATGTTACC
GAAGCATTGG AGGACGCACT AAAATGA
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| Protein sequence | MTISATATAT PAAAKTAAKT ASINVRVTKD VKAQAEELFA SFGITLSEAI NMFLHKSLMV
EGLPFDLKQP KYNKETIAAF KEYDYMKAHP EEYKRYDNVT EALEDALK
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