| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1000 |
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| Symbol | |
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| ID | 8709173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1132215 |
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| End bp | 1134185 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646483093 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374208 |
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| Protein GI | 283783454 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG3096] Uncharacterized protein involved in chromosome partitioning |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATT TTCAGAATGC TACGTGGAGC GTGATCCAAT TGGATTATGC GAACGCGTTT
ATTCCTGACG TTCGTTTGAA CGGTGGCGAC GAGAATGGGC GTATTATCCG CGTGCAATTG
TTAGATAATG GTGTGCCGGT TGATGATTCG ACTGTTGAAG TGTTCTTGTG CTGGAATCGC
CAGCCGGGGG TGCTTATTGG TGACCGCGTA AAAATGGAAG CGAAGGATTC TGACGATGGT
CGCATTTGGC AGGTGGCGGT GCCGGTTGCG GCTTGTCGTA TGCCGGGCAC AGTGACTCTT
GGTTTTGAAG TGAAACGTGA TAAGACGATC GTTTGCTCGC GTAGTTTTAC TGCTATTGTC
GAGCAGCCGG TTTTTGACGC TGGTTCGCCT GAGGGTAAGT CTTACAGGCA GGAGCTTGAA
GACACGGCAC AACAAGCAAA GGACGCTACT GGTAAAGCTA ACGCTTTAAC TGATAAAGTT
TCACACCTGA TTGAACAGAA TGAAACAGTA TCGCGGAATG CTCAAAATGC GGCTGATGCC
GCTAATAATG CTACTAGCAT AGCGCAACAG GCGGCACAAC AAGCAAAGGA CGCGGCAAGT
GAAGCATCAC AAGCTGCTCA AAACACTCAA AACGTTATTA GTCACGCTAC TGAAGTTGCC
CAACAGTGTG ACGCTAGTAA ACAGACTGCT GACCAAGCAG CAAAGCGCGC TGATGATGCT
GTGAGTGGGT TAAAGCAAAC TGTGCAGAAT GCTGCTGCTG ATGCGGCTAG TAAAGTGCAG
CAGGCTGTTG AGCGCGCTAA CAGTGCGACT CAAGCCGTGG ACGCGGTTCG TGAGAAAACA
GAAGCTGCAA ACAAACAAAC TGAAACCGAT CTAGCAGCAT TAAGAGAAGA GGTCGTTAAA
GCTCAGCGCG CCGGCTTTAC CGCGTCATCT AGCGCGCAAA AATGCGATGA AGCAGCACAA
GCTTATAGGA ACGTGTCCGG TGAGGTAGCT CAAGCTAAAC AGACTAGCGA ACAGGCGGTT
GAAGCGGCTA ATCAGGCGTT GCATACGGCT CAGGAGTCTG CTGCTGCGGT GGCTCAAGCT
CAGAGCGTTC TTGACCAAGT AAAGGATGCT AGCGAGACTG CTAAGCGTGT GGTGAGTGCT
GTTGAAGAGT TGAAGCAGAC GAATAACGCG GCACTTGAAG CTACTCGTAC GGCTAACGCT
CAAGCGTCTG CAGCCGCTGA TGCGGCTGGC AAGGCTAATA ATGCTACTAG CACAGCCAAC
AGCGCAGCGC AAGCGGCGAA TGATGCGGCT GGCAAGGTTA CGCAGACTTT GCAAGAGTCT
GAAACACGTT TTAAAGCTGT TGAACAGGCA GCGAATGATG CTAAAAGCGT GGCTGGTACG
GCGAATAGTA CAGCTGAAGC GGCGCGCTCT ACAGCTGAGC AGGCTCAGAG CAAAGCTAAC
GACGCGGCGG GATCAGCTCA ACGCGCTCAA AACACAGCTA ACAGTGCTAT TGAAGCTACT
GATAACAATA AAAATCGCAT TGACTCTATG GAGTCGGATG TTAGCTCGTT AAAAAACTCT
TGTAGCGCAG CACAGAGTAA GGCGAACGAT GCGGCTCAGA CTGCTAGTAA AGCACAGTCG
GTAGCGGATA GTGCTAATAG TGCGGCGCAA GCAGCTGCTA GTAAAGCTGA TAGCGCACAA
CAAGCAGTAA ACAACATTCG CACACCAATA GTAAAACCCC AATCATTGAC CGGTTACACA
ACCCCAAGTT CTTGGGATTG GACTCTAACA GATTTAAAAG AATTACCACA TGGGGGGCAT
ATTCTCATCT ACCCACAAGC TGACAGTATT AAAGAGTACA TGCGCCAGCA GCCAGAGTTC
GAGATTGAAG AACAGAATGG TGTGCGAACA GGGAAAATAA CTGTAATAAC TCACCAGCCG
AATACTAACG GTTCTGCTCT AAAGCTTGTT TTTGTTTGGT TTGCGGACTA G
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| Protein sequence | MSDFQNATWS VIQLDYANAF IPDVRLNGGD ENGRIIRVQL LDNGVPVDDS TVEVFLCWNR
QPGVLIGDRV KMEAKDSDDG RIWQVAVPVA ACRMPGTVTL GFEVKRDKTI VCSRSFTAIV
EQPVFDAGSP EGKSYRQELE DTAQQAKDAT GKANALTDKV SHLIEQNETV SRNAQNAADA
ANNATSIAQQ AAQQAKDAAS EASQAAQNTQ NVISHATEVA QQCDASKQTA DQAAKRADDA
VSGLKQTVQN AAADAASKVQ QAVERANSAT QAVDAVREKT EAANKQTETD LAALREEVVK
AQRAGFTASS SAQKCDEAAQ AYRNVSGEVA QAKQTSEQAV EAANQALHTA QESAAAVAQA
QSVLDQVKDA SETAKRVVSA VEELKQTNNA ALEATRTANA QASAAADAAG KANNATSTAN
SAAQAANDAA GKVTQTLQES ETRFKAVEQA ANDAKSVAGT ANSTAEAARS TAEQAQSKAN
DAAGSAQRAQ NTANSAIEAT DNNKNRIDSM ESDVSSLKNS CSAAQSKAND AAQTASKAQS
VADSANSAAQ AAASKADSAQ QAVNNIRTPI VKPQSLTGYT TPSSWDWTLT DLKELPHGGH
ILIYPQADSI KEYMRQQPEF EIEEQNGVRT GKITVITHQP NTNGSALKLV FVWFAD
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