| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0913 |
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| Symbol | metK |
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| ID | 8709100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1043821 |
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| End bp | 1045038 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646483011 |
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| Product | methionine adenosyltransferase |
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| Protein accession | YP_003374127 |
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| Protein GI | 283783373 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0192] S-adenosylmethionine synthetase |
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| TIGRFAM ID | [TIGR01034] S-adenosylmethionine synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGAAC GTAAATTAAT TTCTGCAGAA TCTGTAACTG AAGGTCATCC TGACAAGTTA
TGCGATCAAA TTGCTGACGC TATATTGGAC GATATGCTTC GTCAGGATTC TCATGCGCAT
GTTGCTGTAG AGGTTTGTGC TTCCGTTGGT CAGTTTGTGG TTTTTGGCGA AGTGCGTGGT
GAAGTTTATA GCGATATTCC GGGAATCGTG CGTCAAGTTG TTCGTAATGT TGGCTACACG
AGCTCCACAA TTGGTCTTGA TGCTGATTCT TGTGGTGTTA TGGTTTCTTT AACTGAGCAA
AGTGCAGAAA TTAATCAAGG TGTTGCTAGG TTGGATGCTT CTTGCGAGAG TGCATCTTCT
CGTGAGGAGC ACTACGCTGC TCAAGGTGCA GGCGATCAAG GTGTTATGTT TGGTTACGCT
AGCGACGAAA CAGATACTTT AATGCCTTTG CCGATTTATC TTGCTCATCG TTTAGCTCAA
AAGCTTGCTA AAGTTCGTAA AGATGGCACT GTTGCGCATT TGCGTCCAGA TGGGAAAACT
CAAGTAACGA TTGAGTATGA TTCAAAAGGA TTGCCTAAAC GTTTGGATAC TGTGCTTATT
TCTACTCAGC ATGACCCAGA AGTTTCTAGA GACTGGTTAC AAGATCAGCT TGTTGAACAT
GTTGTTAATC CTGTGTTGGA CGAAGTTCTT GCTCAAAAAG TTGCGCACGA TTCGTACCGT
ATGCTTGTAA ACCCTACTGG CTCCTTCGTT TTGGGAGGTC CTGCAGCTGA TTCGGGCTTA
ACTGGTCGAA AAATTATTGT TGACACTTAT GGTGGTGCTG CTCATCATGG TGGTGGAGCT
TTTTCCGGTA AGGATCCTAG CAAAGTTGAC CGTTCTGCAG CTTATGCAGC TCGCTGGGTT
GCAAAAAATA TTGTGGCAGC TGGTTTAGCT CATAAGGCAG AAGTTCAAGT TGCTTATGCT
ATTGGTATTG CTGATCCTGT AAGCGTAAAC GTAGAAACTT TCGGAACTGA AGCTGAAGGT
ATTACGCGTG CAGATATTGC GCGTGCTGTG CGTGAAGTAT TTGATTTGCG TCCAGCTGCG
ATTATTGATG AGCTTAACTT GCTTAAGCCA ATTTATGCTC CAACCGCAGC TTATGGTCAT
TTTGGTCGTA CGGATGTCAA ATTCCCTTGG GAAGAAACGA ATCGTATTGA GCAATTGAAA
GATGCGCTAA AAAAGTAG
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| Protein sequence | MEERKLISAE SVTEGHPDKL CDQIADAILD DMLRQDSHAH VAVEVCASVG QFVVFGEVRG
EVYSDIPGIV RQVVRNVGYT SSTIGLDADS CGVMVSLTEQ SAEINQGVAR LDASCESASS
REEHYAAQGA GDQGVMFGYA SDETDTLMPL PIYLAHRLAQ KLAKVRKDGT VAHLRPDGKT
QVTIEYDSKG LPKRLDTVLI STQHDPEVSR DWLQDQLVEH VVNPVLDEVL AQKVAHDSYR
MLVNPTGSFV LGGPAADSGL TGRKIIVDTY GGAAHHGGGA FSGKDPSKVD RSAAYAARWV
AKNIVAAGLA HKAEVQVAYA IGIADPVSVN VETFGTEAEG ITRADIARAV REVFDLRPAA
IIDELNLLKP IYAPTAAYGH FGRTDVKFPW EETNRIEQLK DALKK
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