| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0808 |
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| Symbol | tsf |
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| ID | 8709501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 911451 |
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| End bp | 912302 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646482909 |
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| Product | translation elongation factor Ts |
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| Protein accession | YP_003374026 |
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| Protein GI | 283783272 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0264] Translation elongation factor Ts |
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| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAA TTACTGCAGC GTTGATTAAG CAGGTGCGTG AAGAAACCGG CGCCGGCATG
ATGGACGTTA AAAAGGCTCT TACTGAAGCT GAAGGCGACG TTGCCCGCGC TAAGGAAATC
ATCCGCGCTA AGGGTATTCA GGCAGCTGGT AAGCGTGAAG GTCGTAAGGC TCAGGAAGGT
ACCATCGCTT CTAAGGTTGT TAAGTCTGCT GAAGGCGAAA CTGGTTACGC AGTTGAGTTG
AATTCTGAAA CTGACTTTGT GGCAAAGACA CCAAAGTTTG TGGAATTCTC AAACACTGTT
CTTGACCATG CTGTTGAAGC TAATGCTTCT ACTGCTGAAG AAGTACTTGC AGCACCAGCT
GATGGCGCAA CTGTTAAGGA ATCTGTTGAA GAAGCAGCAG CTTTGTTTGG CGAGCACGTC
AAGGTTGGTC AGGTTGCTAA GGTAAGCGGT CCACACGTTG AGATTTATGC TCACAAGAAG
TCTGTGGAAT TGCCTCCAAG CATCGTTTCC ATGATTGCTA CTGACGAGGC TGGTGCAAAG
GTTGCTCACG AAGCTGCTTT GCAGATTTCC GCTATGGGTG CGCAGTGGCT TCGCCGCGAA
GATGTTCCAG AAGAAGTTTT GGAATCTGAG CGTCGCGTTG CAACCGAGAA GTCCTTGGCT
GAAGGCAAGC CAGAGAAGAT TGTTCCAAAG ATTGTTGAAG GACGTATGAA CGCTTTCTTC
AAGGAAACTG TACTTCTCGA GCAGGCATAC GTTAAGGATC CATCCAAGAG CGTTGGTGAC
TTGTTCAAGG AAGTTGGCGG CACCGCTCTT GCCTTTGCTC GCGTTGAGGT TGGCAAAGGT
GCTGCTGAAT AA
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| Protein sequence | MAAITAALIK QVREETGAGM MDVKKALTEA EGDVARAKEI IRAKGIQAAG KREGRKAQEG
TIASKVVKSA EGETGYAVEL NSETDFVAKT PKFVEFSNTV LDHAVEANAS TAEEVLAAPA
DGATVKESVE EAAALFGEHV KVGQVAKVSG PHVEIYAHKK SVELPPSIVS MIATDEAGAK
VAHEAALQIS AMGAQWLRRE DVPEEVLESE RRVATEKSLA EGKPEKIVPK IVEGRMNAFF
KETVLLEQAY VKDPSKSVGD LFKEVGGTAL AFARVEVGKG AAE
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