| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0705 |
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| Symbol | hup |
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| ID | 8709266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 799382 |
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| End bp | 799663 |
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| Gene Length | 282 bp |
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| Protein Length | 93 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646482810 |
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| Product | DNA-binding protein HU |
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| Protein accession | YP_003373932 |
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| Protein GI | 283783178 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATACA ACAAGTCTGA TCTCGTTTCT AAGATCGCAC AGAAGTCCAA CCTGACCAAG
GCACAGGCCG AAGCCGCCGT CAACGCATTC CAGGATGTGT TCGTTGAGGC TTTACAGTCC
GGTGAAGGTT TGAAGCTTAC TGGTCTGTTC TCCGCAGAAC GCGTAAAGCG TGCTGAGCGC
ACTGGCCGCA ACCCGCGTAC CGGTGAAACC ATCAAGATTC CAGCTTCTTA CGGTGTACGT
ATTTCCGCTG GCTCCTTGTT GAAGAAGGCT GTTACTGCCT GA
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| Protein sequence | MAYNKSDLVS KIAQKSNLTK AQAEAAVNAF QDVFVEALQS GEGLKLTGLF SAERVKRAER
TGRNPRTGET IKIPASYGVR ISAGSLLKKA VTA
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