Gene HMPREF0424_0666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0666 
Symbol 
ID8709701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp749919 
End bp750392 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content39% 
IMG OID646482771 
Productseptum formation initiator 
Protein accessionYP_003373895 
Protein GI283783141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATGA AAAAGCGTCG TAAAACAGCA TTAGGTGAAG ATGTAGCACC ATTGCAACAG 
CGTCGACTAC TTTCAGGACC ACTTGTGTTT TTATTTATGG TTTTTGTAGT TACTGTTGGT
TCAATTGAGT GCATTTCAAC AGTTAGAAAT TATGCGTTAA GCTTATCTGA GCTTCATGCA
CTTCAGCGTG AAGAAAGTGA TTTACGTGAA CAAAAACGTA CGTTGGATAA TAATATTGAC
CGATGGAAAG ACAAAGCATA CGTTACCGCT CAAGCTAGAG ATCGTCTCGG CTTTATTTTT
CCCGGTGAGC AGGCTGTTCG CGTAGAGCAT CCTGAAGCAG TAACTGGAAA AGTTCCGAAT
GAATTTGCTC AAGAAAATAG CGAAACTAAG ACTCATTCAG TCTTGCCTTG GTATAGTGAC
TTAATGTATG CAATACATAA AGCAGACAAA CCAGATACTG TGCCATCCTT ATAA
 
Protein sequence
MVMKKRRKTA LGEDVAPLQQ RRLLSGPLVF LFMVFVVTVG SIECISTVRN YALSLSELHA 
LQREESDLRE QKRTLDNNID RWKDKAYVTA QARDRLGFIF PGEQAVRVEH PEAVTGKVPN
EFAQENSETK THSVLPWYSD LMYAIHKADK PDTVPSL