Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0666 |
Symbol | |
ID | 8709701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 749919 |
End bp | 750392 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 646482771 |
Product | septum formation initiator |
Protein accession | YP_003373895 |
Protein GI | 283783141 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTATGA AAAAGCGTCG TAAAACAGCA TTAGGTGAAG ATGTAGCACC ATTGCAACAG CGTCGACTAC TTTCAGGACC ACTTGTGTTT TTATTTATGG TTTTTGTAGT TACTGTTGGT TCAATTGAGT GCATTTCAAC AGTTAGAAAT TATGCGTTAA GCTTATCTGA GCTTCATGCA CTTCAGCGTG AAGAAAGTGA TTTACGTGAA CAAAAACGTA CGTTGGATAA TAATATTGAC CGATGGAAAG ACAAAGCATA CGTTACCGCT CAAGCTAGAG ATCGTCTCGG CTTTATTTTT CCCGGTGAGC AGGCTGTTCG CGTAGAGCAT CCTGAAGCAG TAACTGGAAA AGTTCCGAAT GAATTTGCTC AAGAAAATAG CGAAACTAAG ACTCATTCAG TCTTGCCTTG GTATAGTGAC TTAATGTATG CAATACATAA AGCAGACAAA CCAGATACTG TGCCATCCTT ATAA
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Protein sequence | MVMKKRRKTA LGEDVAPLQQ RRLLSGPLVF LFMVFVVTVG SIECISTVRN YALSLSELHA LQREESDLRE QKRTLDNNID RWKDKAYVTA QARDRLGFIF PGEQAVRVEH PEAVTGKVPN EFAQENSETK THSVLPWYSD LMYAIHKADK PDTVPSL
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