| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0663 |
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| Symbol | |
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| ID | 8709315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 746856 |
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| End bp | 747770 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482768 |
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| Product | lactate/malate dehydrogenase, NAD binding domain protein |
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| Protein accession | YP_003373892 |
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| Protein GI | 283783138 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAG TCGCAGTTAT AGGCATGGGA AACGTTGGTG CAGCAGTAGC GCATCAACTT
GTTGTTGGCG GTCACGCTGA TGATTTGTAC CTTTATGATA CAAACGAGGC AAAGGTGAAT
GCCGACGCAT TGGATTTTGA AGATTCAATG GATAATGTGC CTTTTAACGT TAATATTACG
GTTAATGATT ATGAAGCATT AAAAGACGTA GAGGTAATCG TAAGCGCCTT GGGTCACATA
AAGCTTTTGG ACGTTCCTCA TCCAGATCGT TTTGCAGAGC TTAAGTATAA TCGTAAGGAA
GTTGCAGAAG TTGGTGCAAA GATTAAGGCT TCTGGATTCC ACGGTGTTTT GATTGACATA
ACAAATCCTT GCGACGCTAT TTGCCAGCTT TACAAGGAAG CTACTGGTCT TCCTTACGAA
AAGATTATTG GAACTGGCAC TTTGCTTGAC TCTGCGCGCT TGCATCGTGC AGTAGGCAAG
TTCTTTGGCG TGCATCCAAA GGCTGTTAAG GGATATAGCT TAGGAGAGCA TGGTGATTCG
CAATTTGTTG CGTGGTCCAC AGTTAAAGTC TTTGAGCAGC CTATAACAGA GCTTATTAAA
GAAAAGAACA TGGATTTAGA CGCTATTGAT GAGGAAACTC GCGAAGGCGG ATTTACAGTG
TTCTACGGAA AGAAGTACAC AAACTACGGT ATTGGTGCTG CTGCAGTTCG TTTAGTGGAT
GCAGTTCTTT CAGATTCTAA AGAGCAAATG CCTGTTTCTA ACTATCGCGA AGAATACCAT
TCTTATCTTT CTTACCCAGC AATTGTTGGT AGAGAAGGAA TTGTTAAGCA ATGCCAACTT
GACTTGACTG AAGAAGAGTT GCAAAAGTTG CAGCATTCTG CAGATACAAT TTTGAGTAAA
GCTCAAGCAG AATAG
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| Protein sequence | MRKVAVIGMG NVGAAVAHQL VVGGHADDLY LYDTNEAKVN ADALDFEDSM DNVPFNVNIT
VNDYEALKDV EVIVSALGHI KLLDVPHPDR FAELKYNRKE VAEVGAKIKA SGFHGVLIDI
TNPCDAICQL YKEATGLPYE KIIGTGTLLD SARLHRAVGK FFGVHPKAVK GYSLGEHGDS
QFVAWSTVKV FEQPITELIK EKNMDLDAID EETREGGFTV FYGKKYTNYG IGAAAVRLVD
AVLSDSKEQM PVSNYREEYH SYLSYPAIVG REGIVKQCQL DLTEEELQKL QHSADTILSK
AQAE
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