| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0585 |
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| Symbol | |
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| ID | 8709098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 637179 |
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| End bp | 638663 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482694 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_003373821 |
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| Protein GI | 283783067 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.785291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT TTTCTAACAT TCTTGCTACT CGTCCTGATT TTAATGACAG TGATCGTGAG
TGGCTTCACC ATTTGGTGGT CGATTGGCAG GTTATTGCAG ATTTGAGTTT CGCAGATTTG
CTGCTGATTA TTCAAAATGG TGACGGTGAT TATGTTGTTG CTGAACAATG TCGTCCTTCA
ACAGCTATTA CTTTGCGTAC TGATGATTTG TTAGGTAAAA AATTAGATGA TTCTTTAGTA
CCTGAGCTTA ATGAGGCGAT GAAATCTGAG ACAAGTTTCC ACTCTTCGAC CTTACGTTCT
ATTGGTAGAG CTACTGTATG CTACGTTTAT GCTCCAGTTC GTCATAGGGG TAAAACTCTT
GGATTGGTTA TGCGCGAAAC TAATTTGGCA ACGCGTGAAT CTAATGGTCG TTATGAAACT
GAAAGTATTA ATGCTGGTAA GACTTTATTT GACATGATTC CTCGTGAACA ATTCCCATAT
CGTGAATCTG TATTAAATCA ACGACATAAT GCTCGAGTAT CCGATGGTTT TATTGTGCTA
GAAGACGATG GAATAGTTCG TTATGCTTCC CCTAATGCCA TTAGTTGTTT CCGCAGACTT
GGCGGATTAA ACACTATGCA AGGTGAATAT TTAAGCGAAT TTGGCACTAG GTTGTTGCAT
ACGAACGATA ATGTTCCCGA AAGTTTACCT CTTGTATTAA CTGGAAAAGC TGATGTAGAT
TGTGAACTTG AAGCGAACCA TTCTATAGTT TCCATGCGCT CCTTGCCTCT GTGGGGTCCA
AATAATCGTG TTGGAGCTGT AGTGTTATGC CGTGATGTTA CTGAAGTTTT GCGGCGCGAA
CAAGAATTGC GTACTAAGAA TGCCACTATT TCTGAAATAC ATCATCGCGT AAAAAACAAT
TTACAGGCTG TTTCTGCTCT TTTGCGTTTG CAAGCTCGTA AAACAAAATC TATTGAAGTT
AGAAAAGAAC TTGAGGAAGC TCAACGTCGT GTGCAAACTA TAGCACTAGT TCATGAAGGC
TTGAGTCAAA CTGCTGACGA AATTGTTGAT TTTGACAAAG TTATTTCGAG TTTGTTGAAG
ATGTCAATTG AGTTGGCATC TCAGAATCAA AATATCGATA TTGATTTTGT TGGAAAATTT
GGCAGATTAG CAGCTCAGGA TGCTACACCA TTATCTCTTG TTTTAACTGA GCTAGTGACG
AATGCAGTTG AACATGGTTT TGAAGGTCGT GAAAAAGGTC ATATTCGTAT TGCAGTTGGT
AGGGGCGGAG ACAATCTTAA TATTGTCGTT GAAGATGATG GAGATGGTAT AGATAGCGAG
TCTTCTCATG GAATGGCTAA ACCATCTGGC TCTGGCCTTG GAACGCAGAT TATAAACACA
TTTGTCACTA ACGATTTTGG TGGTACAGTT CGTTGGTCTC CTCGAAGAGA GGGCGGAACT
AGGGTAGTGT TAGACATTAA ATTGCGCGTA TCTGGTATTG AGTAG
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| Protein sequence | MADFSNILAT RPDFNDSDRE WLHHLVVDWQ VIADLSFADL LLIIQNGDGD YVVAEQCRPS
TAITLRTDDL LGKKLDDSLV PELNEAMKSE TSFHSSTLRS IGRATVCYVY APVRHRGKTL
GLVMRETNLA TRESNGRYET ESINAGKTLF DMIPREQFPY RESVLNQRHN ARVSDGFIVL
EDDGIVRYAS PNAISCFRRL GGLNTMQGEY LSEFGTRLLH TNDNVPESLP LVLTGKADVD
CELEANHSIV SMRSLPLWGP NNRVGAVVLC RDVTEVLRRE QELRTKNATI SEIHHRVKNN
LQAVSALLRL QARKTKSIEV RKELEEAQRR VQTIALVHEG LSQTADEIVD FDKVISSLLK
MSIELASQNQ NIDIDFVGKF GRLAAQDATP LSLVLTELVT NAVEHGFEGR EKGHIRIAVG
RGGDNLNIVV EDDGDGIDSE SSHGMAKPSG SGLGTQIINT FVTNDFGGTV RWSPRREGGT
RVVLDIKLRV SGIE
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