| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0498 |
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| Symbol | |
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| ID | 8709852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 545245 |
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| End bp | 545679 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482612 |
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| Product | cytidine/deoxycytidylate deaminase family protein |
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| Protein accession | YP_003373739 |
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| Protein GI | 283782985 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.115067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATATTT GGGATACAAT GTATGAAAAG GCGAAGCCAC AATTTCATCC AGAGGAAGTT
TCTCCATTCA TTTACGCACA TCATGTTGTA TGTGCAATAG AAGCTGAAAA CGGAGAAATT
TTCACGGGTT TCTGCATTGA GAGCTGCAGT GGTGTTCTTA ATTTGTGCGC AGAACGCGTG
GCCGCTCTTA ATATGTATGT GAATAGCGGA CAGACGAAGG TGAAGCGCTT TATCGCATTC
CGCGACAAGG CACCTTATGG CGCGGGAAGC GGTATGCCTT GTGGAGCGTG TAGAGAGTTC
TTTTATCAAT TGAATGAAGA AAATGAAAAA ATGGAGATTA TGGAGGACTT TGAACAGCGG
AAGACTGTTA CATTGAAGGA GCTCCTGCCA AATTGGTGGG GCAAAGATAG ATATGCTGAA
GCGAAAGCAA AATGA
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| Protein sequence | MDIWDTMYEK AKPQFHPEEV SPFIYAHHVV CAIEAENGEI FTGFCIESCS GVLNLCAERV
AALNMYVNSG QTKVKRFIAF RDKAPYGAGS GMPCGACREF FYQLNEENEK MEIMEDFEQR
KTVTLKELLP NWWGKDRYAE AKAK
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