| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0492 |
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| Symbol | |
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| ID | 8709467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 538104 |
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| End bp | 538925 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482606 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373733 |
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| Protein GI | 283782979 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.165754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCAC AGGAATCTTT ACAGAAGGTC GAAGAAGAGT TTTCTTCGCA AGAGTTTTCA
AATGAAGTAA AACTCGACGA TTATGCGCAA ACCAACAATT TTGTGCAGAC TAAAAAACGC
TCAGGATTAG CGACATTGGC TTCAATCGGA GCAGAAGGGT CTACATTTTC TGTAATTGAT
TCATTGGGTG GCATTCGAGG CGTAATTGAA TCCATGCTTC CAGGCTTGCT GTTTGTTATT
TGCTTTGTTG TAACGCGTAA CGTACAAACA ACGGTTATTG TGGCAGCTGT GATTGCTGTT
TTGCAAGTTG TGGTTCGTCT TATTCAGAGG CAATCGCTTA TGGGAGCAAT TAGTGGACTT
GTTTCCATTG CAATTTGCCT TATTTGGGTG TGGACGAGTC ATCAAGCACG CGACTACTAC
ATGATGGGTT TTATTACAAA CGCTGTTTAT GGTGTGCTTC TTGCTATTTC GCTGATTGTG
CGCATGCCTG CTTTAGGGCT TGTGATTGAG TCAATTCGCA AAATGCCTAC AGAAAACTTT
GGTGCGTGGC TTCATGAATG GCTCGATTAT AAGCCGCTTA AGCGAGCGTA TATGTATGTG
ACAGGATTGT GGATTGCTGT TTTTGTGCTG AGGCTCGTTT TGCAAGTGCC ATTATATTTG
ACGAATCACG TTGTATGGCT TGGTACCGTT CGCTTGATTA TGGGATTGCC GTTTTGGGCG
CTCGCAATTT GGGTTTCTTA CTTGATTATT GCAACGCCGT TTATGCGTCT TCATCATAAA
AATCATGAAG AGAAGCAGAG CGAAGAAAAT CAGCTTAACT AA
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| Protein sequence | MDSQESLQKV EEEFSSQEFS NEVKLDDYAQ TNNFVQTKKR SGLATLASIG AEGSTFSVID
SLGGIRGVIE SMLPGLLFVI CFVVTRNVQT TVIVAAVIAV LQVVVRLIQR QSLMGAISGL
VSIAICLIWV WTSHQARDYY MMGFITNAVY GVLLAISLIV RMPALGLVIE SIRKMPTENF
GAWLHEWLDY KPLKRAYMYV TGLWIAVFVL RLVLQVPLYL TNHVVWLGTV RLIMGLPFWA
LAIWVSYLII ATPFMRLHHK NHEEKQSEEN QLN
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