| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0430 |
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| Symbol | xseB |
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| ID | 8709491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 470946 |
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| End bp | 471266 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646482545 |
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| Product | exodeoxyribonuclease VII, small subunit |
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| Protein accession | YP_003373676 |
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| Protein GI | 283782922 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01280] exodeoxyribonuclease VII, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000201128 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGAGA AAGTAACGAA AAAAGCGGAA GAATCAGCAG AAAACACAGA ATTTGCAAGC
ACACTTACGA AAGAAGAGCG CGCTGCGATT GAGACGATGC CGTACGAAGA GGCTCGCGAA
AAGCTGGTTC AGGCGGTTCA AGCGTTGGAA GCTGGCGGTT TGACACTAGA TCAGTCCATG
CGTCAGTGGG AGATTGGCGA GGCGCTGGCA AAGCGCGCGC AGGGTTTGCT TGCCACGGTT
CGCGCTAAGT TGGACGCGGC ACAAGCGGAA CAATCGGCGA CGGCGGCTAC GGCTGGCACG
CAGTCTAATC TTGAGGATTA A
|
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| Protein sequence | MSEKVTKKAE ESAENTEFAS TLTKEERAAI ETMPYEEARE KLVQAVQALE AGGLTLDQSM
RQWEIGEALA KRAQGLLATV RAKLDAAQAE QSATAATAGT QSNLED
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