| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0362 |
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| Symbol | |
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| ID | 8709275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 390108 |
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| End bp | 391370 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646482478 |
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| Product | acetyl-CoA C-acetyltransferase |
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| Protein accession | YP_003373612 |
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| Protein GI | 283782858 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG TGGTGATTGC AAGCGCTGTA CGTACGCCTA TTGGCAAATT CGGCGGCAGC
TTATCTTCGC TTTCCTCAGT TGATTTAGGA ACAATCGCAG CAAAAGCAGC AATAGAACGC
GCTAGAATTA GCTCACACGA CGTGGATCAA GCTATTTTTG GAAACGTATT ACAAGCAGGC
AGCGGACAAA ACGTTGCTCG CCAAATTGCG TTAAAAGCAG GATTAGATAC TTCTAGCTGC
GCAATGACAA TTAACGAAGT ATGCGGATCC GGCTTAAAAG CAGTGCGCTT AGCACAATCC
GCAATCGTTA TGGGAGATGC GCAAGTTGTT GTTGCAGGCG GCACTGAAAG CATGAGCAAC
GTACCGTTTT ACGCAACTAA TTCGCGATTT AGCGGACACA AATACGGGAA TTTTGCGCTT
ATTGACGGTT TGCAACGAGA CGGCTTAAAC GACGCTTTTA CTGGCGACGC AATGGGCGTT
ACTGCAGAAA ATGTTGCAGC AAAATTTGGT ATCACTCGCG AAGCACAAGA TATTTTTGCA
CTTAAATCTC ACCAAAAAGC TGTTGCCGCT ATTAAAAGAG GCGATCTTGC TTCTGAAATT
GTGCCAGTAA CGCTTGCAAA CGGAACTGTT ATAACTCAAG ACGAGCATCC TCGCGAAGAT
ACGTCTTTAG AGCAGTTGTC GAAATTGCGC ACGCTTTTTA AAGCGTCGGG AGAAACTGCG
GACGCGACTT GCGAAGTTGA CAAGCGCGAA GTTGGCGAAA ACGAAGTTTG CAAGCACGAA
TCGACTGTAA CTGCAGGAAA CGCAAGCGGA ATTAACGACG GAGCTGCAGC TCTAGTGCTT
ATGAGCAAAG ATTACGCGCA AGCGCACGGA ATTGAATATC TTGCGCAAAT TGTGGGATTC
GCAGAAGGCG GAATCGACCC AGATTTAATG GGATACGCTC CAAAACATGT GATGGAACGC
ATGCTAAATG CGACCGGCAG CAACGTTGAC AACATTGACT TATTCGAAAT AAACGAAGCG
TTTGCAGCGC AAAGCATTGC CGTTTCGGAG CAACTCCATA TTGACGAGTC AAAACTAAAC
GTACGCGGTG GAGCAATTGC ACTCGGACAT CCGCTCGGTG CTAGCGGAGC GAGGATTTTG
ACGACGCTTA TATACGCTTT GCGAGATAGA AATAAGTTAA ATGGAGTTGC TGCGCTGTGC
GTCGGCGGCG GAATCGGCGT TTCTATGCAA ATTAGAATGC GAAACAATAA AGTCAGAATG
TAA
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| Protein sequence | MTEVVIASAV RTPIGKFGGS LSSLSSVDLG TIAAKAAIER ARISSHDVDQ AIFGNVLQAG
SGQNVARQIA LKAGLDTSSC AMTINEVCGS GLKAVRLAQS AIVMGDAQVV VAGGTESMSN
VPFYATNSRF SGHKYGNFAL IDGLQRDGLN DAFTGDAMGV TAENVAAKFG ITREAQDIFA
LKSHQKAVAA IKRGDLASEI VPVTLANGTV ITQDEHPRED TSLEQLSKLR TLFKASGETA
DATCEVDKRE VGENEVCKHE STVTAGNASG INDGAAALVL MSKDYAQAHG IEYLAQIVGF
AEGGIDPDLM GYAPKHVMER MLNATGSNVD NIDLFEINEA FAAQSIAVSE QLHIDESKLN
VRGGAIALGH PLGASGARIL TTLIYALRDR NKLNGVAALC VGGGIGVSMQ IRMRNNKVRM
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