| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0313 |
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| Symbol | mvaD |
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| ID | 8709675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 339691 |
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| End bp | 340788 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482430 |
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| Product | diphosphomevalonate decarboxylase |
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| Protein accession | YP_003373567 |
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| Protein GI | 283782813 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3407] Mevalonate pyrophosphate decarboxylase |
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| TIGRFAM ID | [TIGR01240] diphosphomevalonate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0381784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATG TTGAAATTCA GCCAAAAATA ACGTTTGACG CTAGTCTTTC ACCCAACTCA
GCTTTTGCTA AAGCAAACGC GAATATTGCG CTGATTAAGT ATTGGGGTAA GCGCGATGAA
AAGCTGATTT TGCCTTATAC TTCCTCGCTT TCGCTCACTC TTTCGGATTT GTCCACAACT
ACAAGCGTAA GTTTTGTGAA TAATCTTGAA CAAGATACTT TTACTTTAGA TAATGAAAAG
ATTTCGTCAT CTGCCAAAAC TTTTCGTCGC GTAGTAGCTA TGCTCGATTT GGTGCGTGAA
ATTGCAAGAA TTTCAACGAA AGCAAGCGTT ATTTCGCATA ATATTGTGCC AACTGCTGCT
GGTCTTGCGT CGAGTGCGTC TGGTTTTGCA GCTCTTGCGT CTGCTGCCTC GTACGCTGCT
GGATTAAACC TAACTCCACG AGAACTTTCT AGACTTGCAA GACGTGGTTC TGGTTCAGCT
TGTCGTTCGA TTTTTGGAGG ACTTTCAATT TGGCATGCAG GTTGCGACGA CGAAACATCT
TACGCAGAGC CTATTGAAAA CGCACAAGTT GCGCTTAAAA ATTTAAACCT TGCTATGATT
GTTGTTACTT TGGACGATAG CAAAAAGCCG ATTTCTAGCC GAGAAGCGAT GCGCAGAACG
GTTGAAACTT CGCCAACGTA TATGCAATGG GTTGAGCAGT CGAAAGACGA CCTTGAAATT
GCTAAAAACG CAATTAAGCG AGCAGATATT GAGCAATTGG GTGAGGTTGT TGAACGCAAT
GCTTTTGGAA TGCACGAAAC TATGCATAAT GCTGTTCCGT CGGTGAATTA TTTAACTAGC
AGCACGCATA TTGTGCTTGA AGCGGTTAAA AATATGCGAA AAGATGGTTG GCTGGTGTGG
TCTACGATGG ATGCTGGTCC AAATGTGAAG GTGCTTACTT CTGGAGATGA TGCTTATCGT
GCGATGTGTC AGTTGCGCTC GCGAGTTGAG GATGGTTTAC GTAATTCTAG CGTTTTTTGT
AATACAGAAT ATTGCGAGCC GAAATTTGCA ATTGCGCTGC CAGGTGACGC TGTGACGGTG
AGTACGAGTT TAAAATAG
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| Protein sequence | MQNVEIQPKI TFDASLSPNS AFAKANANIA LIKYWGKRDE KLILPYTSSL SLTLSDLSTT
TSVSFVNNLE QDTFTLDNEK ISSSAKTFRR VVAMLDLVRE IARISTKASV ISHNIVPTAA
GLASSASGFA ALASAASYAA GLNLTPRELS RLARRGSGSA CRSIFGGLSI WHAGCDDETS
YAEPIENAQV ALKNLNLAMI VVTLDDSKKP ISSREAMRRT VETSPTYMQW VEQSKDDLEI
AKNAIKRADI EQLGEVVERN AFGMHETMHN AVPSVNYLTS STHIVLEAVK NMRKDGWLVW
STMDAGPNVK VLTSGDDAYR AMCQLRSRVE DGLRNSSVFC NTEYCEPKFA IALPGDAVTV
STSLK
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