| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0279 |
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| Symbol | |
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| ID | 8709513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 298404 |
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| End bp | 299663 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482397 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373535 |
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| Protein GI | 283782781 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAATA TTTTGGATCA AGTAAGAAGC GATTTTCGTA CTTTTGCTCA AAGAAGTTTT
AATTCTGTTG ATGCTTTGAT TTTGTGTGAG CTTTCATACA TAAATATGCC AAAATCTATT
CCGCTATATA ACAGTGAGTC AAAAGTTATT TCGACTACGC CTATTTACGA TCTGCTACGT
TTTGAAGATT TTTCGTCGAT GTTTTCTTCT GGAGTAGCTA AGGTTGATAA GTTTCGTCAA
GAGTTACTTT TTGCAGTTGC AGCTAATCCG CGCTACAGAG GTATTAAAGT AGGGGAAATT
CTTGAACGAT TTGATAAATC GAATGCTCAT GAATCTTGTG AACAGCAGTT TGCTGGTGTT
ACTTTTGACC TTAGTTCTTG TGAAGGAATT GATAATCCGA ATACTATTGT TGTTGCTTTT
AGAGGAACTG ATAATACGCT TGTTGGGTGG AAAGAAGATT TTAATATGGC CTTTCGCTGC
CCAATTCCAG CTCAGGAGTC AGCAGCAGAA TATTTAATTT CTGTAACACA AAGATATAGT
AAATATATTG CAAAAAAAGC TAGTTTATTA CAAAAAATTT CCTCGTTTTT CGCAAAATCA
ACTAATTCGA AGCGTGACAA TTGCGATAAC AATAATAAGC GCGATAATAA TAACAAGCGC
AATAACAGCC CGAATATTAT TGTCACAGGT CATTCAAAAG GTGGGAATAT GGCGTCCTAT
GCTACTATGC GATTGGATGC GGAAAATGAA AAACTTGGCA ATCTTGTATC TAAAATTTAT
TCAATGGATG GGCCGGGTTT TGCAAATGAT GTAGTAGATA CTAGCGTTTT TTCGTGCGTG
GCAAGTCGAA TAGAGAAAGT TGTGCCGCAA TCTTCGATTA TTGGGCTTCT TATGGATAAT
GGATTGCCAT ATAAAGTAGC TAGGGCTGAT TCTGTTGGTT TAATGCAACA TTTTGGCATG
TATTGGCATG TTGAGGATGG TGATTTTGAC TATCGAGATG AAGTTACTGC TCGCGCTGCT
GCAATCGCAA AAGCTATGAA TTCTTGGATG TTTGATTTGC CTGTTGAGGA ACGAAAACGC
AGGATTGATA GTGTGTATAA CGTTTTGTCG AGTTTAGGTT ATCCTACTTT TGATTTATTG
GGTTCTCATT GGTCTGAGCT TGTGCCAAAA TTACTTGGAA TGGCAACGCA CTTGGATGCG
AAGTCTTATG AGCTTATACG CGGAATTATT GCTGCTGTTG CTGGCGTAGG CGTGAAGTAA
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| Protein sequence | MPNILDQVRS DFRTFAQRSF NSVDALILCE LSYINMPKSI PLYNSESKVI STTPIYDLLR
FEDFSSMFSS GVAKVDKFRQ ELLFAVAANP RYRGIKVGEI LERFDKSNAH ESCEQQFAGV
TFDLSSCEGI DNPNTIVVAF RGTDNTLVGW KEDFNMAFRC PIPAQESAAE YLISVTQRYS
KYIAKKASLL QKISSFFAKS TNSKRDNCDN NNKRDNNNKR NNSPNIIVTG HSKGGNMASY
ATMRLDAENE KLGNLVSKIY SMDGPGFAND VVDTSVFSCV ASRIEKVVPQ SSIIGLLMDN
GLPYKVARAD SVGLMQHFGM YWHVEDGDFD YRDEVTARAA AIAKAMNSWM FDLPVEERKR
RIDSVYNVLS SLGYPTFDLL GSHWSELVPK LLGMATHLDA KSYELIRGII AAVAGVGVK
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