3 homologs were found in PanDaTox collection
for query gene HMPREF0424_0228 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013721  HMPREF0424_0228  FHA domain protein  100 
 
 
443 aa  906    Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_1669  Tfp pilus assembly protein  43.82 
 
 
497 aa  200  3.9999999999999996e-50  Bifidobacterium longum DJO10A  Bacteria  normal  0.577043  n/a   
 
 
-
 
NC_013174  Jden_0455  FHA domain containing protein  48.08 
 
 
125 aa  43.9  0.005  Jonesia denitrificans DSM 20603  Bacteria  normal  0.107862  normal  0.788327 
 
 
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