| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0228 |
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| Symbol | |
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| ID | 8709384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 255160 |
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| End bp | 256491 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482347 |
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| Product | FHA domain protein |
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| Protein accession | YP_003373489 |
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| Protein GI | 283782735 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAGC GACAAACCGT GCAGCGCTGG ATGATTACAG TTGGTGGTGT CGAGCAGGCA
CGTGTGGGTG CAGGTCAGTC TGTAGAGATT GGTCGAAAGC CTATACGCCC GTTGCGTGAA
GATGGTTTCG CGCGCGTCGA CATAGTGGAT AATAAACGTT CTATGTCAAA GAGGCATGCG
CTGCTAATTG TAGACATGCG AGGCGTGGCA ACAATACGAG ATTTGCATTC AACTAACGGT
ACATATTTAG TCAGCGCAAA TGGTGATTTG CTGCGTCTAG AGCCTGATGT TGATTTTCAG
CTTCCAGATA ACTTAATGCG CATGCAATTC GGTGATGTTC CTGTTGATTT TGTGCGTGTA
GAAGAAGAAT CTGCTGAAGT TGAAAAAGAT AACGCAGTGC GTAATCTGTT CTCTTATGCT
ACAGATGAAT CGCATGATGA GCCTGCAGCT TCAGATTTAT CAGTAGATCA AATTCTTGAT
TTGCGCGCTG GTGAGCCAAC AGGTGTTTTC CATGCTCAAT CAGTTTCGCA TCCTGGATTG
TCTTGGAAAC AAGGCATGCA GAATCATACT CAGCTCAATG ATGATTCGCA AACAGATGTT
GCTCCAATCA ATCATGATGT AACTTTGCCT GTTATGCGAG AACAGCAGGA GGTTCCTGTA
GAGCCGCGTA ATTTATTTGC AGATGCGCAA GCGATTCAGC AAGAAAGTTC AACTAAAGAA
GAACCTTCAC AACAAGATTC TGTGATTTCT TCGGTTTCTG CAGTTGATCA AGCTGATTCA
GTTGCTCAAG CTTCTCCGGT TACGCCAGTT AATCCGGAAA CAAATATATT GCAAAACGAA
AGTTCTCAAG AATTTCTAGT ATCTCCATTA AATTCAACTG AAACTTTTGC TGAAAATATT
GCCAATACTT CAGCTTTTAA TGGTGCAAAT ACAGGTTCTA ATAATCTCGA TATTAACAGT
TTTGGCTCTA CGAATCTCGG TACTACAAAT CTCGACTCTA ATAATCTCGA TATTAACAAT
TCTGATGCGG AGTACACACC TGCATTTGAG CCAGGCTCCG TATTTGAAAA AGTATCAAAA
GGCGAATTTG ACTCTCAAGA AAATGTAGTG GAAGCCGGCG GATTTACGTC AAAAGAAGCT
GAAGAAAGTA GTGATTTTTC AAAGCAATTT GAGATGGCGC AATATTCGCA GTTGCTTCCG
TTCTTGGCTG CAAACACTGG GTTATATGAT GACTTATACG CGTGGCTCGC AGCTCAAGGT
AATTCTGAAG TAGATGCTGC ACTAGCTAGA AACAGCGGTT ATAGTGCATA TCGCAAAGCT
ATTGAACAGT AA
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| Protein sequence | MSERQTVQRW MITVGGVEQA RVGAGQSVEI GRKPIRPLRE DGFARVDIVD NKRSMSKRHA
LLIVDMRGVA TIRDLHSTNG TYLVSANGDL LRLEPDVDFQ LPDNLMRMQF GDVPVDFVRV
EEESAEVEKD NAVRNLFSYA TDESHDEPAA SDLSVDQILD LRAGEPTGVF HAQSVSHPGL
SWKQGMQNHT QLNDDSQTDV APINHDVTLP VMREQQEVPV EPRNLFADAQ AIQQESSTKE
EPSQQDSVIS SVSAVDQADS VAQASPVTPV NPETNILQNE SSQEFLVSPL NSTETFAENI
ANTSAFNGAN TGSNNLDINS FGSTNLGTTN LDSNNLDINN SDAEYTPAFE PGSVFEKVSK
GEFDSQENVV EAGGFTSKEA EESSDFSKQF EMAQYSQLLP FLAANTGLYD DLYAWLAAQG
NSEVDAALAR NSGYSAYRKA IEQ
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