Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_4282 |
Symbol | ubiA |
ID | 5166621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 4945230 |
End bp | 4946102 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640551761 |
Product | prenyltransferase |
Protein accession | YP_001232998 |
Protein GI | 148266292 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCTGT TCGACAAAAT CAAGGTATTC CTGGAGATGA TCAAGTTCTC CCATACCATC TTCGCTCTCC CCTTTGCTTT TACCGGCGCA TTGCTGGCCG CGCGCGGCCT GCCGACTGCC TACCAGACGC TCTGGATACT TATGGCCATG GTCGGTGCCC GCACCGCAGC CATGAGTCTG AACCGAATGA TAGACGCGGA GATCGACGGG CAGAATCCGC GAACCAGCGG GCGTGCCCTG CCGGCCGGCT TGCTCAGCAA GGGGATGGTG GCCGTTTTCA TTGCCCTATC CCTCACTCTC ATGCTCTTTG CCGCCCGGAT GCTCAACCCT TTGTGCCTCT ATCTTTCGCC GGTGGCGCTC TTTTTTCTCG TGCTCTATTC CTATTGCAAG CGCTTTACCG CTCTGGCCCA TGTGGTGCTC GGGCTTTGCC TGGCTGCCGC GCCGCTCGGC GCCTGGATCG CCATTACCGG TACGATTGAA CTCCCTGCCG TGCTCCTGGC GTTGGCGGTT CTTCTCTGGG TGGCCGGATT CGACATCCTT TACGCACTAC AGGATCTGGA ATTCGACCGG ACCAGCGGAC TCCACTCCAT CCCGGTACGG CTCGGCATCT CCGGCTCACT CTGGACCGCG CGCATCTTCC ACCTGCTGAT GATCGCTCTT TTGACCGGCC TCTTCTTTCT ACTGCACCTC GGTCCGTACT TCTTTGTCGG CCTGACCATT ACCGTCATCT TGACTGCCTA CGAACACTGG CTGCTCCGTG ACGGCGACCT GACCAGGCTC GACGCCGCGT TCTTCAACAT GAACGGCTAT ATCAGCGTCA CCGTTCTGGT CTTTACCCTG CTCGACATCC TGTTTTACCG GGGGGGGGCA TGA
|
Protein sequence | MNLFDKIKVF LEMIKFSHTI FALPFAFTGA LLAARGLPTA YQTLWILMAM VGARTAAMSL NRMIDAEIDG QNPRTSGRAL PAGLLSKGMV AVFIALSLTL MLFAARMLNP LCLYLSPVAL FFLVLYSYCK RFTALAHVVL GLCLAAAPLG AWIAITGTIE LPAVLLALAV LLWVAGFDIL YALQDLEFDR TSGLHSIPVR LGISGSLWTA RIFHLLMIAL LTGLFFLLHL GPYFFVGLTI TVILTAYEHW LLRDGDLTRL DAAFFNMNGY ISVTVLVFTL LDILFYRGGA
|
| |