| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4229 |
|---|
| Symbol | |
|---|
| ID | 5165113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4889227 |
|---|
| End bp | 4890342 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640551707 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001232945 |
|---|
| Protein GI | 148266239 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0271349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGGA TTGGGGCGGT CGTAGCCTGC CTGATGTTTA TCGCAACACT CTCCGTCCTT
CCCGGATGCA GTGAAAAGAT GAAGGAGGGG GCAATCCCAC AGGACGTGCC CCATGTAAAG
GGACTTTCCA CGGAGAAAGT CACAGAGAGC GATATACCCG AACTCCTTGA AGCGGTGGGT
ACTGTCAAGT CGAAAAATAC CGCACTTATT GCCGCCCGCA TCTCCGGCAT CGTTAGAACC
ATTTCGGCAA AGGAAGGGGA CCGGGTTGCC AGAGGGAAGC ATCTGATAAC ACTTGAAGCC
AATGAAAGCT CGGCCGCGGC AGAAGCGGCA TCCGCTGCTG TGGAAGAAGC AAGGCGTGGT
ATTGATGAGG CTCTCGCGCG CAAAAAACTT GCAGATACAA CATTTGACAG ATTCCATAAG
CTCTATGACG AGCAGGCAGT GACCAGGCAG GAATTCGACG GCAGGCAAAC GGAGAAGGAG
CTGGCCGCAC AAGGGCTGGC CCGCGCAGAG GCGCGGCTGG CACAGGCACG TGGAAATGCC
AAAGCGGCAG ATGCCGTGGC CGGATATGCC AAGATCGCGG CGCCGATAGC CGGCATAGTC
ACTGCAAAGG CCGTAGACGT CGGCATGACC GTACTGCCCG GCATGCCGCT GATAACCGTA
GAAGAAGAGG GCAATTACAG GCTGGATGTC GCCGTGCCTG AAACAATGCT GGGAAGGGTG
AAAATAGGCG ATGCGGTCCG TGTTGCAATA GAGGGGAGCG ATGCAGAAAC AAGCGGGAGA
GTGGTCGAGG TGGTTCCGAC CGTTGACCCG ATGAGCAGGA CCTTTATCGC AAAGATTGAC
CTTGCTGCGA AAGGTTTACG TTCCGGTGTT TACGGCCGGG CACTGTTCGC TACCGGCAAA
AGGAAAGGGG TGCTGATACC TAAAAGCGCC GTCGTCGAAA GGGGTGCGCT TACGCTTGTC
TGGGTGGTGG ACAAGGAGCA CAGAGTGGGA ATGCGTTTGG TAAAAACCGG CAAAGGCGTT
GCTGACAAGG TGGAAATCCT CTCCGGTCTG TCAGCAGGTG AACTGGTCGT AACCGCCGGA
GTGGAGAAGG CTGTCGATGG CGCAAAGGCC GAATAG
|
|---|
| Protein sequence | MKRIGAVVAC LMFIATLSVL PGCSEKMKEG AIPQDVPHVK GLSTEKVTES DIPELLEAVG
TVKSKNTALI AARISGIVRT ISAKEGDRVA RGKHLITLEA NESSAAAEAA SAAVEEARRG
IDEALARKKL ADTTFDRFHK LYDEQAVTRQ EFDGRQTEKE LAAQGLARAE ARLAQARGNA
KAADAVAGYA KIAAPIAGIV TAKAVDVGMT VLPGMPLITV EEEGNYRLDV AVPETMLGRV
KIGDAVRVAI EGSDAETSGR VVEVVPTVDP MSRTFIAKID LAAKGLRSGV YGRALFATGK
RKGVLIPKSA VVERGALTLV WVVDKEHRVG MRLVKTGKGV ADKVEILSGL SAGELVVTAG
VEKAVDGAKA E
|
|---|
| |