| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3902 |
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| Symbol | |
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| ID | 5167070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 4553088 |
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| End bp | 4555766 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640551384 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001232624 |
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| Protein GI | 148265918 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000292646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCGG AAAAACCAAC CATCTATCTC ATCGACGGCT CATCATACAT CTACCGGGCT
TACTATGCGA TTCGCCATCT TTCTTCGCCG AAAGGGTTCC CCACCAATGC GCTCTATGGC
TTCATCCAGA TGCTTTTGAA GGTGATCAAG GAGAAAAAAC CGGACCATCT CGCCGTGATT
TTCGACGCCG GCCGGCAGAC CTTCCGCAAC GAAATCTATG CCGACTACAA GGCAAACCGC
GCTGCCATGC CTGACGACCT GCGGCAGCAG ATTGAGCCGA TCAAGGAGGC GGTGCGGGCT
TTCAACATCC CGGCGCTCGA GTTGGCCGGT TTCGAGGCCG ACGACATTAT CGGCACCATC
GCCCGCGATT GTGAAGAGAA GGGGATGGCC GCGGTGGTAG TGACCGGCGA CAAGGATCTG
ATGCAGATCG TCAGCGACAA CGTCACGCTT CTGGATACCA TGAAGGACAA GGTTTCGGGG
CCTGCCGAGG TGGTTGAGCG GTTCGGAGTT GGTTCTGAGC GGGTTATCGA CATCCTCGGC
CTGGCCGGCG ACTCTTCCGA CAATATTCCC GGTGTTCCCG GTATCGGCGA AAAGACGGCG
ATCAAACTGG TAAACGATTT CGGTTCGCTG GATGAGCTCC TGGCGCGGGC CAATGAGGTG
AAGGGAAAGA CCGGCGAGCG TCTGCAGGAA TTTGCTGAGC AGGCTCGTCT CTCGCGGAGG
CTTGCAACCA TCGATTGTCA TGTCCCTTTG GCCTGGTCTT ACGACGACTT TGCCGCGTCT
CCGCAGGACA ACCGGCGGCT GGCGGAATTG TTCAAGGAAT ACGGATTCAC GACGCTGATG
AAGGAGTTGA CCAGTGAGGC GACCCTCTCG GCGGAAGATT ACCGGACCGT TCTCTCCTCC
GACGATTTCA CGGCCCTTGT CCGGCAATTG ACCGCCGTCC GGGCCTTTGC CGTTGACCTG
GAAACCACGA GTCTCAACCC GCTCGAAGCG GAGATCGTCG GCATCTCCTT CTCTTTCCGC
GAGCATGAGG CGTACTATAT CCCGGTCGGC CACCGCTATC CGGGGGCGCC GCACCAGCTC
TCCCGCGACG ATGTACTCGG AGCACTCAAG CCGCTACTGC TCGATCCGGA GAAGCACAAG
ATCGGTCAGA ACATCAAGTA CGATTACCAG GTGTTGCGCC GGGCCGGGAT CGATATGCAG
GGGATCTGGT GCGACACCAT GCTCGCCTCC TATCTGCTCA ACCCGACCCG CACCAGCCAG
GGGCTTGATT CGCTGGCAGT GGAATTTCTC GATCACAGGA TGATTTCCTA TGCCGAGGTG
GCCGGCAAGG GGAAGGAACA GAAGAACTTC GCCCAGGTCG AAGTGGAGAA AGCGTCGGTC
TATTCCTGCG AAGACGCCGA TGCCACCTAT CTCCTGCACA AGCTCTTCTT GCCGAGGCTT
GCCGAGTCAG GGATGGAACG GCTCTTTTTC GAGCTGGAGA TGCCGCTGGT CAAGATCCTG
GCCGAGATGG AGCTGTACGG GGTAAAGCTC GACCTGCCGC TTTTGCAGCG CCTCTCAGAC
GGATTCGGCG GCCAGCTTGC CGACTTGGAG CGAGAGATCT TCGCCCTGGC CGGGGGAGAG
TTCAATGTCA ACTCGCCGAA GCAGCTGGGG GAGGTCCTTT TTGAGCGCTT GCAACTGCAG
GTCGGCAAAA AGACCAAGAC CAAAACCGGC TGGTCGACCA ATGTAGACGA ACTGGAACGG
CTGGCCGGGG AGCACGAGAT TGCCCGGCTG ATCCTCCAGT ACCGGAGCCT GTCCAAGCTG
AAGTCCACCT ATACCGATGC CCTGCCCAAG CTCGTCGATG CTGCATCGGG GCGGGTCCAT
ACCTCTTACA ACCAGGCGGT GACCAATACA GGTCGACTCT CTTCGTCGGA GCCGAATCTG
CAGAACATCC CGATCCGCTC GGAAGAAGGT CGCAGCATCC GCCATGCCTT CATTGCCGCG
GAGGGGTGCC TCCTCCTTTC CGCCGACTAT TCACAGATCG AACTGCGGGT TCTGGCCCAC
CTGTCGGCGG ACCGGGTCTT CTGTGACGCT TTTGCCAGGG ACGAGGACAT CCATACCCGG
ACCGCCGCCG AAGTGTTCGG CCTCTTCCCC CAGATGGTTA CCCAGGAGAT GCGTCGCCAG
GCCAAGACCA TCAATTTTGG CGTAATCTAC GGCCAGGGAG CCTTCAGCCT GGCCAGGGAG
CTCGGCGTAT CGACGAAGGT GGCAAAGGAA TTCATCGACA ACTACTTTGC CCGTCACGCA
GGCGCCCGGA CCTTTCTTGA CGGCTGTGTC CGGGAGGCGG AGGATAATGG GTACGTTACC
ACTATTCTTG GCCGGCGCCT TCCCATCCCG GATATCAAGA GTTCAAACGG CAACATTCGG
GCCTTTGCCC AGCGGAACGC CGTCAACTAT CCGATCCAGG GGTCGGCGGC CGATATCATC
AAGCAGGCGA TGGTGCGCGT GGTTGACCGG ATGGAGCGGG AGGGGATGAA AAGCCGTCTC
ATCATGCAGG TCCACGACGA ATTGGTGTTC GAGGTGCCGG AAGAGGAAAA GCTGGCGATG
GAGATGCTCG TGAAACACGA AATGGAGCAC GCTGTTACTC TGCGCGTACC GCTCAGGGTG
GATATGAACT TCGGCAGGAA CTGGAGCGAG GCCCACTGA
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| Protein sequence | MMSEKPTIYL IDGSSYIYRA YYAIRHLSSP KGFPTNALYG FIQMLLKVIK EKKPDHLAVI
FDAGRQTFRN EIYADYKANR AAMPDDLRQQ IEPIKEAVRA FNIPALELAG FEADDIIGTI
ARDCEEKGMA AVVVTGDKDL MQIVSDNVTL LDTMKDKVSG PAEVVERFGV GSERVIDILG
LAGDSSDNIP GVPGIGEKTA IKLVNDFGSL DELLARANEV KGKTGERLQE FAEQARLSRR
LATIDCHVPL AWSYDDFAAS PQDNRRLAEL FKEYGFTTLM KELTSEATLS AEDYRTVLSS
DDFTALVRQL TAVRAFAVDL ETTSLNPLEA EIVGISFSFR EHEAYYIPVG HRYPGAPHQL
SRDDVLGALK PLLLDPEKHK IGQNIKYDYQ VLRRAGIDMQ GIWCDTMLAS YLLNPTRTSQ
GLDSLAVEFL DHRMISYAEV AGKGKEQKNF AQVEVEKASV YSCEDADATY LLHKLFLPRL
AESGMERLFF ELEMPLVKIL AEMELYGVKL DLPLLQRLSD GFGGQLADLE REIFALAGGE
FNVNSPKQLG EVLFERLQLQ VGKKTKTKTG WSTNVDELER LAGEHEIARL ILQYRSLSKL
KSTYTDALPK LVDAASGRVH TSYNQAVTNT GRLSSSEPNL QNIPIRSEEG RSIRHAFIAA
EGCLLLSADY SQIELRVLAH LSADRVFCDA FARDEDIHTR TAAEVFGLFP QMVTQEMRRQ
AKTINFGVIY GQGAFSLARE LGVSTKVAKE FIDNYFARHA GARTFLDGCV REAEDNGYVT
TILGRRLPIP DIKSSNGNIR AFAQRNAVNY PIQGSAADII KQAMVRVVDR MEREGMKSRL
IMQVHDELVF EVPEEEKLAM EMLVKHEMEH AVTLRVPLRV DMNFGRNWSE AH
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