| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3407 |
|---|
| Symbol | |
|---|
| ID | 5165015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4005341 |
|---|
| End bp | 4006543 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640550893 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001232136 |
|---|
| Protein GI | 148265430 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.246613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGG CTATCCGCGA CATAAGCTAT CACCGGGGAC GATTCATCCT CACCTCCATC
GGCCTGGGTC TACTCCTCGG CGTGGTGATG AGCATGGGGG GCATTTACCG GGGGCTCTTC
GCAGATGCCC TGGCGGTTCT CGGCGCCACC AGTGCCGACA TCTGGGTGGT CCAGCAGGAT
ACGAACGGCC CCTTCGCCGA GAACTCCCGC ATCCCTGAAG ACATCAGATA CCGCATCGCT
GCGGTTCCCG GTGTGGCACA GGCATCGCCC CTTTCTTTCC AGACGATCCA GATCGAGCGG
CTGGGTAAGC CGTTCCGCTT TTTCCTCATC GGCCACGATT TGAACGGTTT CGGCGGGCCG
CCGGTAATAG TTGCCGGACG GGGCATCCGC CAGAAGCACT ATGAAATGGT TGTTGCCAAG
GGTATGAAGA TGGCGCTTGG AGAAAAAATC CATCTGGGGC TCCATGACTA CACAGTGGTC
GGGATAACGG GTAAAATGGT TTCGTCCAGC GGCGATCCGG CCGCCTATGT GAGCCTGGCC
GACGCCCAGG ATATCCAGTT CAAGAAAGAC AACGATGCGA TCAGAAACGA TCGGCAGAGA
ACCGGTGCGA GGGTTGCCGG CATACAGTCC CTTTCTCCGT CGCAGGTGAA GTCCCTGCAA
AATAACATAT CGGGAATTAC GGAATCCACC CACACGGTAA ATACCGTCGT GGCAAAACTG
GCGCCCGGCG CGGATCTGCA GGAAGTGCAG CAACGGATCG GCCGCTGGAA CCATTTCCGC
GCCATTTCCG GCGAAGAGCA GACAAAGATC CTGACCAAGG GGATGATCGA AAAGGCCAGG
ATGCAGCTGG GGCTTTTCCG GGTCATCCTG CTCGTCATTT CGGCGGTCAT CATCGCCCTG
ATCATTTACA CCTCGACCCT CGACAAGATC AGGGTCATCG CAACCCTGAA GCTGATCGGT
TCCCCGAACC GGGTGATCGT CGGCATGATC CTCCAGCAGT CGCTGCTCAT GGGTGGCATC
GCCTACGGCA TCGGTTATTT CGTGATACTC TTGACCTACG AACACTTTCC CCGCCGGATC
GTCCTTGAGT CCGGCGACCT GCGGTCACTC TTCGCCATAG TCATGGCCAT CTGTGTGATT
TCCAGCTTTG TCGGGATCAG GAAGGCGCTC CGGGTTGAGC CCGCGGAAGC CTTGGGAGGG
TAA
|
|---|
| Protein sequence | MNLAIRDISY HRGRFILTSI GLGLLLGVVM SMGGIYRGLF ADALAVLGAT SADIWVVQQD
TNGPFAENSR IPEDIRYRIA AVPGVAQASP LSFQTIQIER LGKPFRFFLI GHDLNGFGGP
PVIVAGRGIR QKHYEMVVAK GMKMALGEKI HLGLHDYTVV GITGKMVSSS GDPAAYVSLA
DAQDIQFKKD NDAIRNDRQR TGARVAGIQS LSPSQVKSLQ NNISGITEST HTVNTVVAKL
APGADLQEVQ QRIGRWNHFR AISGEEQTKI LTKGMIEKAR MQLGLFRVIL LVISAVIIAL
IIYTSTLDKI RVIATLKLIG SPNRVIVGMI LQQSLLMGGI AYGIGYFVIL LTYEHFPRRI
VLESGDLRSL FAIVMAICVI SSFVGIRKAL RVEPAEALGG
|
|---|
| |