| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2971 |
|---|
| Symbol | |
|---|
| ID | 5162879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3434608 |
|---|
| End bp | 3435153 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640550466 |
|---|
| Product | sigma-54 modulation protein/ribosomal protein S30EA |
|---|
| Protein accession | YP_001231716 |
|---|
| Protein GI | 148265010 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
|---|
| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0546273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAA CAACAACATT CAGACACATG GAGCCGAGTG ATCCCCTTAA AAGCTACGCT
GAGGAAAAAC TGGAAAGGGT CAAAAAATAT ATTGATGAGC CGATCGTGGC CCAAGTCTTC
CTGACTGTGG AGAAAATCCG CCATAGTGCG GAGGTGACCA TTACAGCCAA GGGAATTACC
ATGAAGGCTT CGGAAGAGAC CAACGACATG TATGCAGCGG TCGATGCGGT GGTAGATAAA
ATCGAGCGGC AACTGCGGCG TTACAAGGAG CGGATCAAGG CCCATAAGCC GGCTACTGAC
ACCCGCGAGC GTCTGGTTCA GAAAAGTATC GTCGAGGCTG AAAGTATCGA ACAGCAGAGA
GAACCGGTCA TCATCAGAAC CAAGACCTTT TCCCTCAAGC CCATGTCCGT GGAAGAGGCG
GTTATGCAGA TGGATCTCCT GCACAAGGAT TTTCTGGTCT ATACAGAGGC TGCTACAGAA
AACATCAACG TTATCTATCG CCGTAAGGAT GGCAATTACG GCCTCATAGA ACCGAATAAA
GAGTAG
|
|---|
| Protein sequence | MQITTTFRHM EPSDPLKSYA EEKLERVKKY IDEPIVAQVF LTVEKIRHSA EVTITAKGIT
MKASEETNDM YAAVDAVVDK IERQLRRYKE RIKAHKPATD TRERLVQKSI VEAESIEQQR
EPVIIRTKTF SLKPMSVEEA VMQMDLLHKD FLVYTEAATE NINVIYRRKD GNYGLIEPNK
E
|
|---|
| |