| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2155 |
|---|
| Symbol | |
|---|
| ID | 5165877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 2510783 |
|---|
| End bp | 2511226 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640549651 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001230916 |
|---|
| Protein GI | 148264210 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000155032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATGTA CTGAGCCGGA TAAACTCTTT GCTCGTGGAC TGAGCGCCCT CAACAACGGA
GACAGCCTTT CTGCGTTGGC ATATTTTGAA AAGGCTTTCC AGCTTGAGAA TAACCCTACC
TTTTGCTCAT ACTTTGCCTT TTGTCTGGCG AAAGAACGCG GCCAATATAA TAATGCCGTT
TCTCTATGCA AAGGGGCGAT GGAGATGGAA CCAAACAATT CGATTCATTA TCTGAACCTT
GGGCGAATAT ATATGCTTCT TGGGAACAAA CCTGAAGCAA TGCTGGTATT CCGTCAAGGC
CTTGGGCACG GGAACAGTCC TCAGATTACC GCTGAACTGG ACAGACTTGG CGCAAGAAAG
CCTCCTGTCC TCCCGTTCCT GAAAAGAACT AATCCTTTGA ACAAGTATCT CGGTATTATT
CTGAAGAGGG TAGGTCTAAG GTAG
|
|---|
| Protein sequence | MPCTEPDKLF ARGLSALNNG DSLSALAYFE KAFQLENNPT FCSYFAFCLA KERGQYNNAV
SLCKGAMEME PNNSIHYLNL GRIYMLLGNK PEAMLVFRQG LGHGNSPQIT AELDRLGARK
PPVLPFLKRT NPLNKYLGII LKRVGLR
|
|---|
| |