| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1761 |
|---|
| Symbol | |
|---|
| ID | 5166987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 2042723 |
|---|
| End bp | 2043742 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640549253 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_001230525 |
|---|
| Protein GI | 148263819 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACACCA CTATCCATAA CAAGCTTTTT GCATATCTGG AAGGGAAGAC GAAAACTTAC
CTGCTGATGG CCGGCTATGC ACTGGTGTTT CTCCTGGCGT TCATCGATTA CCTCACCGGT
GAACTCTCCT TCATACTCTT CTATCTGATC CCGGTCTTTC TCGTGGCATG GTTCGTGGGT
AAACGGTCGG GGCTGTTCAT CTGCATGTCC TGCAGCATCG CCAGCTTTAT CGACAAGCTG
CTGGAACACC CCGCTTCATC CCCACAATTT TTACATTCAT GGGATTTCAT CATCGAAACA
AGCTATCTGT TCATGCTCGG CCTCATGTTT TCAACGTTAC GGGAAAAGCA TGACCAGGAA
AAGAAGCTGG CGCGAATCGA CCCTCTCACG CGGGCGCTGA ACCGCCGCTA TCTCTATGAA
CTTGCAGAAC AGGAAATTTA CCGGTCGAGC CGCTATAACC GTTCGTTCAC CGTTGCCTAC
ATTGACCTTG ATAATTTCAA GACCGTTAAT GACAAAAAGG GGCACCATGT GGGGGACGAC
CTCCTGTGCA TCGTCGCCGA CACCATACAG GATAACGTTC GTTATGCGGA TATCGTCGCA
CGGATCGGCG GTGACGAATT CGTCATTATC CTGCCGGAAA CCGGCGCCGA ACACGCGCTG
TCTGCCATAA CCAAGCTGCA GGGAAAACTT GCGGCGGCCA TGGAGTGCAG AGGATGGCCC
GTGACCTTCA GCATCGGCAT GGTAACCTAC AACGTTCCAC CGGAATCGGT CGATGAAATG
CTGAAAAAAG CCGATGACCT GATGTACGCC GTGAAGTCCG ACAACAAAAA CGGGTTAAAA
CATGCGATTA TCAATGAAGG TCAGCAGCAC TCAGACAATC AATTCGAAGC AAAAGGGTGG
ATAAAATCAA ACGCGTCATT CCTGCTACAA GGGTTCAAAA TCAATCCGTC CACAACAATC
TATCTCAGGA AAAAAGAAAA TATTTCCAGG GTCAACAAGA ATGTCAAGGT TCGGCCCTGA
|
|---|
| Protein sequence | MYTTIHNKLF AYLEGKTKTY LLMAGYALVF LLAFIDYLTG ELSFILFYLI PVFLVAWFVG
KRSGLFICMS CSIASFIDKL LEHPASSPQF LHSWDFIIET SYLFMLGLMF STLREKHDQE
KKLARIDPLT RALNRRYLYE LAEQEIYRSS RYNRSFTVAY IDLDNFKTVN DKKGHHVGDD
LLCIVADTIQ DNVRYADIVA RIGGDEFVII LPETGAEHAL SAITKLQGKL AAAMECRGWP
VTFSIGMVTY NVPPESVDEM LKKADDLMYA VKSDNKNGLK HAIINEGQQH SDNQFEAKGW
IKSNASFLLQ GFKINPSTTI YLRKKENISR VNKNVKVRP
|
|---|
| |