| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1637 |
|---|
| Symbol | |
|---|
| ID | 5166763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 1901551 |
|---|
| End bp | 1902384 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640549133 |
|---|
| Product | rhomboid family protein |
|---|
| Protein accession | YP_001230405 |
|---|
| Protein GI | 148263699 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000280354 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAC GAGCCATGCT CTGCCCCCGC TGCCGGCGCC TGATCGGCAG CAGTGAATCC
TCCTGCTCAT GGTGCGGGGC ATCGCGACCT GCCGCCTGGT GGCAGTCGAC CGCCTGGATA
CGGGGAGCCC TCGACGGCGA CTGGATGGTC AGGACAATCG TAACTGCCAA CATCATTTTC
TATATTCTTT CCCTCCTCTT GAGCGCCCGC CACGGGTTTT CCGCAAATCC TTTCAGCCTC
CTCTCGCCGG ACAAGACGAG CCTTTTGCTG CTCGGTGCGA CCGGAACGGT CCCCATCGAC
CGGTTCGGCC GGCTCTGGAC GCTCCTCTCC GCCAATTACC TCCACGGCGG TATTTTGCAC
ATCTTCTTCA ACCTTATGGC TATGCGCCAG ATCGCTCCGT GGGTCAATCA CGAATACGGC
CCCAACCGCA TGTTCACCAT CTATACCCTG GGAGGGGTAT GCGGTTTCCT GGTTTCCTAC
CTGGCCGGCG TTCCTTTTAC CATCGGCGCT TCAGCGGCTG TCTGCGGCCT GATCGGCTCG
CTTCTCTACT TCGGCAAGAG CCGTGGGGGA GCCTACGGAA CTGCGGTCTA CCGGGAAGTA
AGCGGATGGG TGGTCGGCCT GGTCCTGTTC GGCCTGGTGA TGCCCGGAAT CAACAACTGG
GGGCATGGCG GCGGGATCAT CGGCGGGATT ATCCTGGGGA GGCTCCTGGG CTATGAGGAC
CGACGAGGAG AGACGGCCAT CCATCGATTC CTGGCGCTGC TTTGCGCGGT GGCGACTGCC
GGGGTGCTGG GGTGGGCGGC TGTCAGCGCC ATTGCACTCT GGTTCGGTTA TTGA
|
|---|
| Protein sequence | MTQRAMLCPR CRRLIGSSES SCSWCGASRP AAWWQSTAWI RGALDGDWMV RTIVTANIIF
YILSLLLSAR HGFSANPFSL LSPDKTSLLL LGATGTVPID RFGRLWTLLS ANYLHGGILH
IFFNLMAMRQ IAPWVNHEYG PNRMFTIYTL GGVCGFLVSY LAGVPFTIGA SAAVCGLIGS
LLYFGKSRGG AYGTAVYREV SGWVVGLVLF GLVMPGINNW GHGGGIIGGI ILGRLLGYED
RRGETAIHRF LALLCAVATA GVLGWAAVSA IALWFGY
|
|---|
| |