| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0551 |
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| Symbol | |
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| ID | 5163675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 648468 |
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| End bp | 651281 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640548053 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_001229338 |
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| Protein GI | 148262632 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCGT TAAAACTCCA ACTACTTAAA CTCAGCGAAA AAATTGCCGG TTTCGGCAAG
GAAAATCTGG ACGAGATGCT CCATACGGTT GCCGAAGGAT TAAGGCTGGT GACCGAACAG
GAACGGATCA GGATCTATCT GGAAGATCTG ACCAAGGGGG CGCTCTCCTG CGCTTACGCG
TCAGGCCCCT TTGCCGGCGA AATCCGTGAA GCAACCTTCC CCATCATCTC CCGCGATGCA
ATTGTCTCCA GCGTTTTCGT CTCCCAGTAT CCGGCGGAGT TCCGCAATGC CGCCAAACAG
AACCTGAGTC TCGACAAAGG TTTCGCCGAA AGCTTCAAAA TCGCGGCATC CTACCTCCTC
CCCATCACCA GCCTGGGAAA ATCCTTCGGC GTGATCTGCA TCGACCGGGA AATGGCGGGC
GAAGTGGTGA ACGGCCGCGA CAAAGGACTT CTCGGCGACT TCGTCGCATC GATCGGAGAA
CGTCTCGATT ACGCGAGGAA GTACCACCAG CAACTCCTCC TTGCCCGCAG CGTAGAGGAA
TACAAAAAAC GCGAAACCGC CGCCTTCATG ATGAAATCGG CGGTCCGGCT CATCGACCGG
TTGTCGCTGG CCTCGGTGCT GGTGCCGATT TCAGGCAGAG GCGGCGAAGG CGCCCTGGAA
ATCCTGGCAA GTTATTCGGA AGAACCCCAG CTGAAGGCAC TCTACGACGA GCAGGGCTCC
ATCGACCTGC AAAAGGGGAA GTCGCTGATC TCGAAATATG TGGACGACAA CGGCGTCATA
TCCGATGAAA GGTTGTTGCG TCCGCTCTTC ATCGCCGACC TGACCCAGCA CAGCCTGCAA
AAGCGGGCGC TTACCGAAAA GATGGCGCTC CGCTCCGTTT ACCTGGTCCC CCGCTTCGAG
CCCGAAAGCC GGCGGGTGAT CTGCCTGGTG AACTATTTCA CCCGCGACCT GTACCGCTTT
TCCGAGTTTG AAATGGGGCT TTTGCAGACC CATGCGGAAA TGGTGGAAAG CGTCATCCGC
GAAATCGGCG GCGAACACCT GGAAATCAAG GTGCTCGCCG AGATCACCGA CCTGCTCCAG
GAGCGGAACG AAGAGCTGCA ACCCTTCCTG ACCAAGGTGT TGTCCAAGGC CACCGAGCTG
ATCGGCGCGG ACACCGGCAG CATCGCTATC ATCGAGGAGC GGGAAGGCGA GAAGTGGCTT
GTGGTCGAGG ACGAGGAGGG AACCATCGTC GGCGCCAAGA ACAAGGAGTG GCTGAAGAAG
TATATCCCCC CATTCAAGAT CGGCGGGCAG GAGCTCCCCC CCGAGGAGCG GAGCCTCACC
GGTTTCGTCG CCTGGTCCAA GCAGCCGAAG ATCATCGCCA ATGTGGAGGA AGAGCAACGT
GGAGGGGGAT TCCACCGCTC CATGAGCGAG CTGATCAAGA GCGAAATAGC GGTGCCGGTC
ATCAGCGGCG ACGAAGTCAC CGCCGTCATC TGCCTCAACT CGCTGAAACC CGCCTACTTC
ACCGAAGAGC ACAAACGGAT CCTGCAGATC ATCGACCGAC TCACCTCCCG GCACATCGCG
GACATCCAGC GCATCGAGCG ACTGCAGAAC GAGGTCACCC GCCTCCAGAG CGACGTGGCC
TACAAGGACC CGCAGATTTC CTCCTACCGG CTGGGGAACA TCATCGGCAA CAGCCGCAAG
GCCCAGGAAA TCGTCGATTT CATCAACACC GTCTCCCAGC CGCTCTTCAA CCGCATTGCT
CTCTGGAGCA AGAACGTCCT CCAGGAAGCG ACCATCGGCC TCCCCTCCAT CCTCGTCCTT
GGCCAGACCG GAGCAGGAAA GGAATTCTTC TTCAACAACC TCTACAACAA GCTCAATGAA
CTGTACCGGC AGGAGATCAA CCCGAACGGC GAACTCCACG TGAAAAAGAC CAACATTGCC
GCTTACAGCG GCGAGCTCAC CTATTCCGAG CTGTTCGGCC ACAAGAAAGG AGCATTCACC
GGCGCCTACA ACGACCGCAA GGGAATCCTC GAAGAAGCGG GGGGAGGGAT CGTCTTTCTC
GACGAAATCG GCGACGCCGA CCTGAAGACC CAGGTGCAGC TGCTCCGCTT CCTGGACAAC
GGCGGGTTCG TCCGTCTCGG AGACAACCAG GAACGCTTCA GCAGGGTGCT GCTGGTAGCC
GCCACCAACA AGAACCTCCT GGAAGAGATC GGCAAGGGGA ATTTCCGTGA AGACCTCTAC
CACAGGCTGT CGGAGCTGTC GGTAACGGTG CCGTCCCTCA ATGAACGGCG TGAGGACATC
CCCGACCTGG CGACCCACTT CCTCGGCAAG CTCTACCGCA CCTACCGGGG GAAGGACGAA
CCGCGGGACG ACGCGCCGCT CCTGACGGAA GAGGCCAAAC AGGTGCTCGT CAAGCACACG
TACAAGGGAA ACATCCGGGA ATTGCGCAGC TTACTCCTCC GGGCGCTCTT TTTCCGCAAG
GGAAAGCTCA TCGGCGGCGA GGACATCCGC CGGGCCATCA GGGACGGGAT GCGAGAAGCG
CCGACCCAGG CCGCGGCAAA GCTGACCGAA GAGGTCGCGG ACGAGATCAT GACGCAGATC
GGGAACAACA AGGACTTTTG GCAAGCGGTC TATGAACCCT ATTCACAGAA CCTTATTTCC
CGGGACGTGG TCAGGCTGGT CATAGAGAAA ACGAGGATGG CGGTGGGAAA GGGGATGCCG
CAGATCGCCC GCCACCTGAA AGCCGTCGGC GGCGATATCA ACAATGAAGA GGAAGAAAGG
AAACGTTTCT TCAAGTTCAA GAACTTTTTG TACAAGACGG TGAAGATAAG CTAG
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| Protein sequence | MESLKLQLLK LSEKIAGFGK ENLDEMLHTV AEGLRLVTEQ ERIRIYLEDL TKGALSCAYA
SGPFAGEIRE ATFPIISRDA IVSSVFVSQY PAEFRNAAKQ NLSLDKGFAE SFKIAASYLL
PITSLGKSFG VICIDREMAG EVVNGRDKGL LGDFVASIGE RLDYARKYHQ QLLLARSVEE
YKKRETAAFM MKSAVRLIDR LSLASVLVPI SGRGGEGALE ILASYSEEPQ LKALYDEQGS
IDLQKGKSLI SKYVDDNGVI SDERLLRPLF IADLTQHSLQ KRALTEKMAL RSVYLVPRFE
PESRRVICLV NYFTRDLYRF SEFEMGLLQT HAEMVESVIR EIGGEHLEIK VLAEITDLLQ
ERNEELQPFL TKVLSKATEL IGADTGSIAI IEEREGEKWL VVEDEEGTIV GAKNKEWLKK
YIPPFKIGGQ ELPPEERSLT GFVAWSKQPK IIANVEEEQR GGGFHRSMSE LIKSEIAVPV
ISGDEVTAVI CLNSLKPAYF TEEHKRILQI IDRLTSRHIA DIQRIERLQN EVTRLQSDVA
YKDPQISSYR LGNIIGNSRK AQEIVDFINT VSQPLFNRIA LWSKNVLQEA TIGLPSILVL
GQTGAGKEFF FNNLYNKLNE LYRQEINPNG ELHVKKTNIA AYSGELTYSE LFGHKKGAFT
GAYNDRKGIL EEAGGGIVFL DEIGDADLKT QVQLLRFLDN GGFVRLGDNQ ERFSRVLLVA
ATNKNLLEEI GKGNFREDLY HRLSELSVTV PSLNERREDI PDLATHFLGK LYRTYRGKDE
PRDDAPLLTE EAKQVLVKHT YKGNIRELRS LLLRALFFRK GKLIGGEDIR RAIRDGMREA
PTQAAAKLTE EVADEIMTQI GNNKDFWQAV YEPYSQNLIS RDVVRLVIEK TRMAVGKGMP
QIARHLKAVG GDINNEEEER KRFFKFKNFL YKTVKIS
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