| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0257 |
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| Symbol | |
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| ID | 5166399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 318864 |
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| End bp | 319745 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640547756 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001229046 |
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| Protein GI | 148262340 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0319588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATTT CGAAACATCC TTCCGTCGTT ACCATGCCGA AAGCCGAAAA ACCGTACCCT
TCCATCCTTG CTTTCTTGAG CGGAAGATTC CCCGCTATTT CCCGGGAGAT CTGGGAAAAA
CGGATTTCAG AGGGAAAGGT CCTTGACGAA AAAGCACAAC GGATAACGCT GGATACTGAA
TATGCCCCAT TGAGACGCGT TTTTTATTTC CGCGAAGTCT GTACTGAGCC GTTCATTCCC
TTTGCTGAAA AAATCCTGTT TCTCGACGAC GAGATTCTGG TCGCCTGCAA ACCGCATTTC
CTTCCCGTGA CCCCTGGTGG CCGATATGTT GACGAATGTC TGTTGAACCG TTTGCGCGGC
AGCACCGGCA TCGCAGATCT GGCGCCGCTC CACCGCATAG ATCGTGAAAC AGCCGGATTA
GTGCTCTTTT CCGTCAACAA AAAGAGCAGA GGGCTCTACG GCAAACTCTT CTTGAATGGT
CTCATTGAAA AAACCTATCA GGCACTCTCG GCGTGTCAGC CGCTTCAGGA AACAGCATCA
TGGGATATCC GGAACAGAAT AGAGCGGGGA GAACCGTGGT TCCGGATGAA GACGGCACCC
GGCGGAGTAA ATGCCCGGTC CGCCATCAAT CTGGTGGAGG TCAAAGGAGG GATGGCCCGT
TTTACCCTGC AGCCGCGAAC CGGCAAAACC CATCAGCTGC GGATCCACAT GAGCGGTCTC
GGGTTCGGGA TACTGAACGA CAGATACTAT CCTGAGCTGC AGGCCGAAAG TGAGGACAAC
TTCGACACTC CCCTCCAGCT TGTCGCTCAA ATGCTGCGAT TCAAGGATCC ACTCAGCGGC
AGGAACAGAG AGTTTATATC CGAACGCGAG CTGTTATGGT AG
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| Protein sequence | MGISKHPSVV TMPKAEKPYP SILAFLSGRF PAISREIWEK RISEGKVLDE KAQRITLDTE
YAPLRRVFYF REVCTEPFIP FAEKILFLDD EILVACKPHF LPVTPGGRYV DECLLNRLRG
STGIADLAPL HRIDRETAGL VLFSVNKKSR GLYGKLFLNG LIEKTYQALS ACQPLQETAS
WDIRNRIERG EPWFRMKTAP GGVNARSAIN LVEVKGGMAR FTLQPRTGKT HQLRIHMSGL
GFGILNDRYY PELQAESEDN FDTPLQLVAQ MLRFKDPLSG RNREFISERE LLW
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