| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_4138 |
|---|
| Symbol | |
|---|
| ID | 8755829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 4351042 |
|---|
| End bp | 4352679 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | ATP synthase F1, alpha subunit |
|---|
| Protein accession | YP_003411072 |
|---|
| Protein GI | 284992518 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.413993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGC TGACGATCTC CGCTGACGAG ATCCGCAGTG CCATCCAGAA CTACGTCACC
GAGTACTCGC CCGACGTGTC GCGGGAGGAG GTCGGGATCG TCACCGAGGC CGGCGACGGC
ATCGCCCGCG TCGAGGGCCT GCCCTCGGTC ATGACCAATG AGCTGCTCGA GTTCGAGAGC
GGCGTCCGCG GCCTGGCGCT GAACCTCGAC GTCCGCGAGG TCGGCGTCGT CATCCTCGGC
GACTACGCCG GCATCGAGGA GGGCCAGCAG GTCCGCCGGA CCGGCGAGGT CCTCTCCGTG
CCGGTCGGCG ACGGCTACCT CGGCCGCGTG GTCGACCCGC TGGGCAACCC GATCGACGGC
GCAGGCCCGG TCACCACCAC CGGCCGTCGC GCGCTGGAGC TGCAGGCCCC GACCGTGGTC
CAGCGGCAGT CGGTGCACGA GCCGATGCAG ACCGGCATCA AGGCCATCGA CGCCATGACG
CCGATCGGCC GTGGTCAGCG CCAGCTGGTC ATCGGTGACC GGCAGACCGG CAAGACCGCG
ATCGTCACCG ACACGATCAT CAACCAGAAG CAGGCCTGGG CCACGGGCGA CCCCGCCCAG
CAGGTCCGCT GCATCTACGT CGCCGTCGGC CAGAAGGGCT CGACGATCGC CGCCATCCGC
GCCTCCCTCG AGGAGGCCGG CGCGATGGAG TACACGACGA TCGTCGCCGC CCCCGCCTCG
GAGGCCGCGG GCTTCAAGTA CATCGCCCCC TACACCGGCT CGGCCATCGG CCAGCACTGG
ATGTACGAGG GCAAGCACGT CCTGATCGTC TTCGACGACC TGTCCAAGCA GGCCGAGGCC
TACCGCGCGG TGTCCTTGCT GCTGCGCCGT CCGCCGGGCC GTGAGGCCTA CCCCGGCGAC
GTCTTCTACC TCCACTCCCG GCTGCTGGAG CGCTGCGCCA AGCTCTCCGA CGAGCTGGGC
GCCGGCTCGA TGACCGGCCT GCCGCTGGTC GAGACCAAGG GCAACGACGT GTCGGCCTAC
ATCCCGACCA ACGTCATCTC GATCACCGAC GGGCAGATCT TCCTCGAGAC GGGTCTGTTC
AACTCCGGTG TCCGCCCGGC GATCAACGTC GGCATCTCGG TCTCCCGGGT GGGTGGCTCG
GCGCAGATCA AGGCGATGAA GTCGGTCGCC GGCCGGCTGC GGCTGGACCT CGCGCAGTAC
CGCGAGCTCG AGGCCTTCGC CTCGTTCTCC TCCGACCTGG ACGCGTCCAG CCGGGCCACG
CTCGAGCGCG GCCAGCGCCT GGTGGAGCTG CTCAAGCAGG GGCAGTACCA GCCCTACCCG
GTGGAGCGCG AGGTCGTCTC CATCTGGCTC GGCACCACCG GCAAGATGGA CAAGGTCCCG
GTGCCCGAGG TCCGCCGCTT CGAGGCCGAG TTCCTCGACT ACGTCGCCCG CAACCACGGC
GGCGTCTTCG ACGGGATCCG GCAGAGCCGA GCGCTCGGCG ACGACGCCGT CCAGAGCCTG
GAGCGGGCGG TCGAGGAGTT CTACGGCCAG TTCCAGACGT CCGAGGGCGG GACGCTGCGC
ATCAAGGAGG ACGAGGCCGA GGCGATGGAC GCGTCCGAGC GCGGCCAGGA GCGCGTCCAG
GTCAAGCGGA GCGCCTGA
|
|---|
| Protein sequence | MAELTISADE IRSAIQNYVT EYSPDVSREE VGIVTEAGDG IARVEGLPSV MTNELLEFES
GVRGLALNLD VREVGVVILG DYAGIEEGQQ VRRTGEVLSV PVGDGYLGRV VDPLGNPIDG
AGPVTTTGRR ALELQAPTVV QRQSVHEPMQ TGIKAIDAMT PIGRGQRQLV IGDRQTGKTA
IVTDTIINQK QAWATGDPAQ QVRCIYVAVG QKGSTIAAIR ASLEEAGAME YTTIVAAPAS
EAAGFKYIAP YTGSAIGQHW MYEGKHVLIV FDDLSKQAEA YRAVSLLLRR PPGREAYPGD
VFYLHSRLLE RCAKLSDELG AGSMTGLPLV ETKGNDVSAY IPTNVISITD GQIFLETGLF
NSGVRPAINV GISVSRVGGS AQIKAMKSVA GRLRLDLAQY RELEAFASFS SDLDASSRAT
LERGQRLVEL LKQGQYQPYP VEREVVSIWL GTTGKMDKVP VPEVRRFEAE FLDYVARNHG
GVFDGIRQSR ALGDDAVQSL ERAVEEFYGQ FQTSEGGTLR IKEDEAEAMD ASERGQERVQ
VKRSA
|
|---|
| |