| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2257 |
|---|
| Symbol | |
|---|
| ID | 8753928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 2347355 |
|---|
| End bp | 2348797 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_003409309 |
|---|
| Protein GI | 284990755 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.342445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCAG GCACTGCGGC CGACCAACCA CCGGCCACCA AGAAGCGGGA TCGCACCCAC
TGGCTGTACA TCGCCGTCAT CGGCGCGGTG CTCGCCGGCA TCGCGGTCGG CTTCGCCTTC
CCCGAGTTCG CCGTGTCGCT CAAGTGGCTC GGCACCGCGT TCGTCGGCCT GATCAAGATG
CTGATCGCGC CGGTCATCTT CTGCACCATC GTGCTGGGCA TCGGCGCCAT CCGGCAGGCG
GCCAAGGTCG GCCGCATCGG CGGGCTGGCG ATGGGCTACT TCCTGCTCAT GTCGACCATC
GCCCTGGCGA TCGGTCTGGT GGTCGGCAAC ATCCTGAGCC CCGGTGAGGG CCTGCAGCTG
TCCGAGGAGC TGCGCGGCGA GGGCGCCGAA CTGGCCGGCA CGGCCGAGGA GTCCGGCGGC
ACCACCGACT TCATCCTCGG CCTGATCCCG ACCACGCTGA TCTCGGCGCT GACCGAGGGC
TCGGTGCTGC AGGCGCTGCT CGTCGCCCTG CTCACCGGCT TCGCCATCCA GGCCATGGGG
CGTGCGGGCG AGCCGCTGCT GCGCGGCATC GGCCACTTCC AGAAGCTCGT CTTCCGCATC
CTCTCGATGA TCATGTGGGT CGCCCCGATC GGTGCCTTCG GCGCGATCGC CGCCGTCGTC
GGCGAGACCG GGATCGACGC CCTGCAGAGC CTCGCGGTGA TCATGCTGGG CTTCTACGCC
ACCTGCGCGC TGTTCGTGTT CGTCGTCCTC GGCCTCCTGC TGCGCCTGAT CGCCAAGATC
AACGTCTTCT CGCTGCTGAA GTACCTGGGC CGCGAGTTCC TGCTGATCGT CTCCACCTCG
TCGTCGGAGA CCGCCCTGCC GCGGCTCATC GCCAAGATGG AGCACGCCGG TGTCAGCCAG
CCGGTCGCCG GCATCGTCGT CCCGACGGGC TACTCGTTCA ACCTCGACGG CACCGCCATC
TACCTGACGA TGGCCTCTCT GTTCATCGCC GAGGCGCTGG GCGACCCGCT GTCGATCGGT
GAGCAGATCG GGCTGCTGGC CTTCATGATC ATCGCATCGA AGGGCGCGGC GGGCGTCACC
GGCGCGGGCC TGGCCACGCT GGCCGGCGGG CTCTCGGCCC ACCGTCCGGA CCTGCTGGAC
GGCGTCGGCC TGATCGTCGG CATCGACCGG TTCATGTCCG AGGCGCGCGC GGTGACCAAC
TTCGCGGGCA ACGCCGTCGC CACCGTCCTC ATCGCGACGT GGACCAAGGA GCTCGACCGC
GAGCAGCTCG ACGCCGTCCT CGCCGGTGAC CGGCCCTTCG ACGAGGAGAC CATGCTCGAC
GACGACGGCC ACGGCGGCGG CTCCAGCGAC GACAACCTCC CCGCCGACGC GACCAACGCC
GGCCCCGGCC AGCGCGACGC CGGTGACGCG CAGGCCAAGC TGGCGCAGTC CTCGGTGCGC
TGA
|
|---|
| Protein sequence | MASGTAADQP PATKKRDRTH WLYIAVIGAV LAGIAVGFAF PEFAVSLKWL GTAFVGLIKM
LIAPVIFCTI VLGIGAIRQA AKVGRIGGLA MGYFLLMSTI ALAIGLVVGN ILSPGEGLQL
SEELRGEGAE LAGTAEESGG TTDFILGLIP TTLISALTEG SVLQALLVAL LTGFAIQAMG
RAGEPLLRGI GHFQKLVFRI LSMIMWVAPI GAFGAIAAVV GETGIDALQS LAVIMLGFYA
TCALFVFVVL GLLLRLIAKI NVFSLLKYLG REFLLIVSTS SSETALPRLI AKMEHAGVSQ
PVAGIVVPTG YSFNLDGTAI YLTMASLFIA EALGDPLSIG EQIGLLAFMI IASKGAAGVT
GAGLATLAGG LSAHRPDLLD GVGLIVGIDR FMSEARAVTN FAGNAVATVL IATWTKELDR
EQLDAVLAGD RPFDEETMLD DDGHGGGSSD DNLPADATNA GPGQRDAGDA QAKLAQSSVR
|
|---|
| |