Gene Gobs_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGobs_2012 
Symbol 
ID8753683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeodermatophilus obscurus DSM 43160 
KingdomBacteria 
Replicon accessionNC_013757 
Strand
Start bp2085836 
End bp2086738 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content73% 
IMG OID 
ProductExtradiol ring-cleavage dioxygenase class III protein subunit B 
Protein accessionYP_003409072 
Protein GI284990518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGC TCGGTCCCGC TACGACCGCC GCTGCGGACG CCCGCATCCC GGCCGACCAC 
CTCTTTGCCC AGCACCTGCG CCGCGTCGCC GCGCTGGACC CACACCGGGC GTGGACGCCG
GAGGACGGGG CGCTGCCGAG CCTCTACCTG TCCCACGGTG GTGGTCCGAT GCCGTTCTGG
CGGCCCGAGT GGCTGAACCC GTTGCACGAC TGGGCCCGCG CGCTGCCCAA GCCGAAGGCG
ATCCTGGTGG TCTCCGCGCA CTGGGAGTCC GCGCCGCTGT CGATCAGCGC TCCCCGGCCC
ACCGAGCTGG TCTACGACTT CGGCGGCTTC GACCCGCTCT ACTACACGTT CCGCTACGAC
ACCCCCGACG CGGGCGAGCT CGCCCGCGAC GTGGTCCGCC TCATGCCCGA CACCGAGCAC
GTGCACCAGC ACGCCAGCCG CGGCCTGGAC CACGGCTCCT GGGTGCCGCT GAAGATCATG
TACCCGGAGG CCGACGTCCC GGTGCTGCAG CTCTCCCTGC CCACCGAGGA CCCCGACCGG
CTGCTGGCCA TCGGTGAGCG GCTGCGTCCG CTGCGCGAGG AGGGCGTGCT GGTGGTCGGC
TCGGGGCACA TGACCCACGG CCTGCCGTTC ATCACCCGGG GGATGCTCGA GGGGACCGAG
GTGCCGGCCT GGTCGACCGA CTTCGACGGC TGGGCCGCCG ACGCGCTGGC CCGTGGCGAC
GTCGCCGAGC TGTCCCGGTA TCGCAGCGCC GCGCCGGGCC TGCCCTACGC CCACCCGACC
GTGGAGCACT TCACCCCGCT GTTCGTCGCC CTCGGCGCGG CCACCGACCC CACCGCCCCG
GTGATCACCA CCCTGGACGG CTACAGCTTC GGCCTCTCCC GGCGCTCTTT CCAGGCCGCC
TGA
 
Protein sequence
MTTLGPATTA AADARIPADH LFAQHLRRVA ALDPHRAWTP EDGALPSLYL SHGGGPMPFW 
RPEWLNPLHD WARALPKPKA ILVVSAHWES APLSISAPRP TELVYDFGGF DPLYYTFRYD
TPDAGELARD VVRLMPDTEH VHQHASRGLD HGSWVPLKIM YPEADVPVLQ LSLPTEDPDR
LLAIGERLRP LREEGVLVVG SGHMTHGLPF ITRGMLEGTE VPAWSTDFDG WAADALARGD
VAELSRYRSA APGLPYAHPT VEHFTPLFVA LGAATDPTAP VITTLDGYSF GLSRRSFQAA