Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1840 |
Symbol | |
ID | 8753511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 1911161 |
End bp | 1912882 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003408916 |
Protein GI | 284990362 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.445434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGCTG TTCAGCAGGA CCGGCAGGAA GCCAGCACGG ACCCAGTCGG TGAATTCGAC GCCGTCGTTG TAGGAGCCGG ATTCTCCGGT CTGTACATGC TCCATCGCCT GCGCGACAAG CTGGGATTGT CAGCGCGAGT GTACGAGGCC GCCGACGACG TCGGTGGCAC TTGGTACTGG AATCGCTACC CGGGCGCGCG GTGTGATTCG GAGAGCTACT TCTACAGCTT CTCCGACCGC TTGTCCGAGG AGCTCCTCCA GGAGTGGACC TGGAGCGAGC GTTTCGCCGG CCAACCGGAG ATCCTCCGGT ACCTCCAACA TGTCGCCGAC AGATGGGACC TTCGCCGGGA CATTCAGTTC AATACCCGTG TCACCGCGGC TAGCTATGAC GAGGCGAGAA GCCGTTGGGC CATCAGCACA GACGACGGCG ACTGGGTGAC CGCAAAGTTC CTCATCACCG CCGTCGGGTG CCTGTCCGCG GCCAACCTGC CGGAGTTCCA AGGGCGCGAG AAGTTCCGGG GCGAGCAGTA CCACACCGCA CTGTGGCCGC ACGAAGGAGT CGACTTCACC GGCAAGCGGG TCGCCGTGAT CGGCACGGGG GCGACCGGGG TCCAGGCCAT TCCGGAGATC GCCAAAGAGG CGGCGCACGT GTACGTGCTG CAACGCACTC CGAACTACGA CATCGCGGGG GGAAACGGAC CACTGGACCC CGAGTACGTG CAGCGGACCA AGGCCAACTA CAAGGAGATC TGGCAGCGGA CGAGGGAGAC GAGTTTCGGG TTCCCCTATG ACGCTCCGGA CCGGCCGGCC CTCTCAGTGC CCGATGATGA GAGGCAGCGC ATCTACGACA CCGCGTGGGC GGAAGGCGGC TTCCGCATCG GCCTGACGTT CAACGATCTC CTGGTCGATG TGAAGGCGAA CGAAACGGCC TCGGAATTCG TCCGCGCGAA GATCCGGGAG AGGGTGCAGA ACCCGGAGAT CGCCGAGATG CTGGTCCCGA AGGACCACCC CTTCTTCACG AAGCGTCCAC CCCTCGAGAA CGGCTACTAC GAGACGTTCA ACCGAGACAA CGTGACCCTG GTCGACGTCC GGCGGTCACC GATCGAAGAG ATCACCGAAA CGGGTGTGCG GACGAGAGAC GACGAGTACG AGGTCGACAC CATTGTATTC GCGACCGGAT TCGACGCGAT GACCGGCACA CTCTTCAAGA TGAACATCTC CGGCCGGGGC GGCGTCGCCT TGCAAGAGAA GTGGGCGGAG GGGCCGCGGA CCTATCTTGG CGTCGCGACG CAAGGCTTTC CGAACATGTT CATGATCACC GGGCCGCAGA GTCCGTCCGT GCTGAGCAAC ATGCCGGTCT CCATCGAGCA GCACGTCGAC TGGATCGCCG ACTGCATCCG CTACATGCGC GAACACAACA TCGACAAGGT GGAGCCACTG GTGGAAGCGG AAGATGACTG GGTGGAACAC CACAACACCG TGACCCAGGC GACTCTGCTG CCTATGGCCA ACTCCTGGTG GGTCGGGGCG AACATCCCCG GGAAGCCGCG GAACCTGTAT CCGTACGTCG GCGGCGTGGG CTATTACCGG GAGATATGCG AGGAGGTTGC AGCCCATGGC TATGACGGAT TCGGAATGGC AAAGTACGGA TCGTCCTCGG TGACCGGAAC GCGACCTGCC AGTCGCTTCC CGGTCAAGAC GGCGCGCGCG GTGATCGGCT GA
|
Protein sequence | MSAVQQDRQE ASTDPVGEFD AVVVGAGFSG LYMLHRLRDK LGLSARVYEA ADDVGGTWYW NRYPGARCDS ESYFYSFSDR LSEELLQEWT WSERFAGQPE ILRYLQHVAD RWDLRRDIQF NTRVTAASYD EARSRWAIST DDGDWVTAKF LITAVGCLSA ANLPEFQGRE KFRGEQYHTA LWPHEGVDFT GKRVAVIGTG ATGVQAIPEI AKEAAHVYVL QRTPNYDIAG GNGPLDPEYV QRTKANYKEI WQRTRETSFG FPYDAPDRPA LSVPDDERQR IYDTAWAEGG FRIGLTFNDL LVDVKANETA SEFVRAKIRE RVQNPEIAEM LVPKDHPFFT KRPPLENGYY ETFNRDNVTL VDVRRSPIEE ITETGVRTRD DEYEVDTIVF ATGFDAMTGT LFKMNISGRG GVALQEKWAE GPRTYLGVAT QGFPNMFMIT GPQSPSVLSN MPVSIEQHVD WIADCIRYMR EHNIDKVEPL VEAEDDWVEH HNTVTQATLL PMANSWWVGA NIPGKPRNLY PYVGGVGYYR EICEEVAAHG YDGFGMAKYG SSSVTGTRPA SRFPVKTARA VIG
|
| |