| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1730 |
|---|
| Symbol | |
|---|
| ID | 8753401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 1796233 |
|---|
| End bp | 1797678 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003408815 |
|---|
| Protein GI | 284990261 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.219428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCCAG TGAGCGCCGG CCCGGGCAGC GCAGCCCCGC CCCGCCGCAG TCAGTTGTTC
CGGCTCAAGC CGGTCGACGT CATCGTCGCC CAGCACGAGG AGGCCGGCGG CTCCGGGCTG
CGTCGGTCCA TGGGCCTGCT CCAGCTCACC GCGCTGAGCA TCGGCGCGAC CCTCGGCACC
GGCATCTTCG TCATCCTCGG GGAGGCGGTG CCACTGGCCG GGCCGGCGAT CGTGCTCGCC
TTCGTCCTCG CCGCGGTGAC CGCGCTGTTC TCGGCGCTGT CCTACGCCGA GCTGGCCGGC
AGCATCCCGG TCTCGGGCTC CTCGTACAGC TACACCTACG CCACCATGGG CGAGCTCGTC
GCCTGGGTGT GCGGCTGGCT GCTGATGCTC GAGTACGGGG TCTCGGTGGC CGCCGTCGCG
GTGGGCTGGG GCGCCTACAT CGACGACCTG GCCGCCAACA CGATCGGCGC GGTGCTGTCC
GAGGCGCTGT CCGCGCCGCC GGGCGACGGC GGGGTGGTCA ACGTGCCCGC GATGGTCGTC
GTGCTGCTCG CCATGGCACT GCTGCTGCGC GGCACCAGCG AGAGTGCCCG GGTCAACACC
GCGATGGTGG TGCTCAAGGT CGGCGTCCTG CTGTTCTTCT GCGTGGTCGC GTTCACCGCC
TTCCGCGCCG GCAACCTCGC GCCCTTCGTG CCGATGGGCG TCGCCGGCAT CACCGCCGCG
GCCTCGCAGG CGTTCTTCTC CTACATCGGC TTCGACGCCG CCTCGACCGC CGGCGACGAG
GCCCGTGACC CCCGCCGTGA CCTCCCGCGG GCCATCGTGC TGTCGCTGCT GGTGGTCACG
GTCGTCTACT GCCTGGTGGC CCTGGCCGCC GTCGGCGCGG TGCCGTGGCC GCAGATCAGC
GGCTCGGAGG CGGCGCTCGC CGACGTCCTC GCCCTGGCCA CCGGCCAGAC CTGGACCGCG
GTGCTGCTCT CGATCGGCGC GGTCATCGCG ATTGCCAGCG TGGTGCTGAC CGTCCTCTAC
GGGCAGACCC GCATCCTCTA CGCGATGTCC CGTGACGGCC TGGTGCCCCC GGTGTTCTCC
CGGGTCAGCC GGCGCCGGCG GATCCCGGTG GCCAACACGG TCATCGTGAG CGTGGTCATC
GCCCTGCTCG CCGGCCTCGT CCCGCTCGGC GAGCTGGCCA ACGCCACGAG CATCGGCACC
CTGTTCGCCT TCGCGCTGGT CAACGTCGGC GTCATCATCC TCCGCCGCAG CCGTCCGGAC
CTGCCGCGCA CCTTCCGGAC GCCGCTGTAC CCGCTCACCC CGGTGCTCGG CGTGCTGTTC
TGCCTCCTGC TGGTGGCCGG CCTGGGTTCG GCCACCTGGC TGGTGTTCCT GGCGTGGATG
CTGGTGGGGC TGGCCGTCTA CTTCGGCTAC GGGTACCGCC ACTCGGCCCT GCGCACGGGG
GCCTGA
|
|---|
| Protein sequence | MSPVSAGPGS AAPPRRSQLF RLKPVDVIVA QHEEAGGSGL RRSMGLLQLT ALSIGATLGT
GIFVILGEAV PLAGPAIVLA FVLAAVTALF SALSYAELAG SIPVSGSSYS YTYATMGELV
AWVCGWLLML EYGVSVAAVA VGWGAYIDDL AANTIGAVLS EALSAPPGDG GVVNVPAMVV
VLLAMALLLR GTSESARVNT AMVVLKVGVL LFFCVVAFTA FRAGNLAPFV PMGVAGITAA
ASQAFFSYIG FDAASTAGDE ARDPRRDLPR AIVLSLLVVT VVYCLVALAA VGAVPWPQIS
GSEAALADVL ALATGQTWTA VLLSIGAVIA IASVVLTVLY GQTRILYAMS RDGLVPPVFS
RVSRRRRIPV ANTVIVSVVI ALLAGLVPLG ELANATSIGT LFAFALVNVG VIILRRSRPD
LPRTFRTPLY PLTPVLGVLF CLLLVAGLGS ATWLVFLAWM LVGLAVYFGY GYRHSALRTG
A
|
|---|
| |